Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC090617.7-201ENST00000623952 126 ntBASIC3.08□□□□□ -1.92
SNX9Q9Y5X1 AC009033.1-201ENST00000624279 431 ntBASIC3.08□□□□□ -1.92
SNX9Q9Y5X1 AC090617.10-201ENST00000624308 134 ntBASIC3.08□□□□□ -1.92
SNX9Q9Y5X1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX9Q9Y5X1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
SNX9Q9Y5X1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX9Q9Y5X1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX9Q9Y5X1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SNX9Q9Y5X1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.08□□□□□ -1.92
SNX9Q9Y5X1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AC096644.4-201ENST00000563417 2912 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 RNU6-7-201ENST00000364784 107 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 RNU6-8-201ENST00000365467 107 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 SNORA18.3-201ENST00000384122 132 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AL122016.1-201ENST00000403365 367 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AL606923.1-201ENST00000406616 190 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 EEF1A1P40-201ENST00000412883 573 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 ERLEC1P1-201ENST00000433806 578 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 RPL23AP58-201ENST00000440453 469 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 FABP5P13-201ENST00000452144 328 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AC092798.1-201ENST00000458542 409 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 RPL21P41-201ENST00000459863 264 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AP001486.1-201ENST00000463339 476 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AC114786.4-201ENST00000508771 728 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 HIGD1AP13-201ENST00000509878 289 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 TTC39CP1-201ENST00000512513 755 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AC114781.4-201ENST00000513707 639 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AC112206.3-201ENST00000514578 389 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 RNU6-1256P-201ENST00000516539 103 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 SCARNA13-201ENST00000516672 275 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 RNU6-677P-201ENST00000516914 101 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 RANP3-201ENST00000530970 276 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 CYCSP39-201ENST00000565821 309 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 UBE2V2P2-201ENST00000587677 504 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AC024153.1-201ENST00000603103 365 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 MIR15A-201ENST00000607334 83 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AC025253.1-201ENST00000613623 543 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 AL359547.2-201ENST00000615810 418 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 uc_338.34-201ENST00000617467 174 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 MTND1P37-201ENST00000636562 264 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SNX9Q9Y5X1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 UBE2L2-201ENST00000254302 429 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 CBX3P1-201ENST00000325243 554 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 Y_RNA.72-201ENST00000362894 103 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 RNU6-371P-201ENST00000364283 108 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 RNU4-66P-201ENST00000365199 138 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 SNORA4.3-201ENST00000365564 137 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 RNU6-116P-201ENST00000384042 109 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 RNU6-190P-201ENST00000384154 102 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 U3.26-201ENST00000391236 204 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 CISD1P1-201ENST00000393907 327 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AL162578.1-201ENST00000406202 378 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AL645937.1-202ENST00000421799 937 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AL669831.1-202ENST00000428504 417 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AL591212.2-201ENST00000433923 257 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 MTND4P14-201ENST00000435799 1354 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 GTF2IP13-201ENST00000438487 386 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AC098614.3-201ENST00000438957 440 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 SNRPEP8-201ENST00000442866 260 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AC010099.1-201ENST00000455434 375 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 RNU6-953P-201ENST00000459154 107 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 RPS20P22-201ENST00000473700 357 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 RPL21P99-201ENST00000480369 423 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 SUMO2P6-201ENST00000505273 288 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AC025465.4-201ENST00000513422 638 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 Y_RNA.665-201ENST00000516177 98 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 RNA5SP76-201ENST00000516277 87 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 RNU6-914P-201ENST00000516749 109 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 BNIP3P6-201ENST00000549284 499 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AC098826.3-201ENST00000603823 466 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AL161798.1-201ENST00000604630 131 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AL670379.4-201ENST00000605279 254 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 MIR7106-201ENST00000612419 65 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 AC100810.6-201ENST00000638068 285 ntBASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX9Q9Y5X1 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 RNU1-35P-201ENST00000362782 153 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 RNU6-1167P-201ENST00000363227 94 ntBASIC3.05□□□□□ -1.92
SNX9Q9Y5X1 Y_RNA.378-201ENST00000365652 113 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms