Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 MIR450A1-201ENST00000362262 91 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-199P-201ENST00000362954 107 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-245P-201ENST00000384020 107 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 HDGFP1-201ENST00000405943 252 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-607P-201ENST00000411283 108 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 AL360271.2-201ENST00000447710 161 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 Y_RNA.651-201ENST00000459380 103 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 AC005726.1-201ENST00000494679 427 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 IGLV3-26-201ENST00000520756 302 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 RN7SL176P-201ENST00000580352 264 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 AC115085.1-201ENST00000588924 229 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 AC108081.1-201ENST00000604358 221 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 MIR3914-2-201ENST00000637339 95 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 AC008555.8-201ENST00000623602 2168 ntBASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.67□□□□□ -1.5
PDZRN3Q9UPQ7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 RNA5SP173-201ENST00000364857 136 ntBASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 RNU4-17P-201ENST00000365598 141 ntBASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 RNU1-63P-201ENST00000383902 164 ntBASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-76P-201ENST00000384060 104 ntBASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-318P-201ENST00000384283 103 ntBASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 SNORA40.19-201ENST00000390846 128 ntBASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AL158823.1-201ENST00000418441 478 ntBASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 MIR5692A1-201ENST00000580523 69 ntBASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 AC091905.2-201ENST00000623143 306 ntBASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDZRN3Q9UPQ7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-376P-201ENST00000384731 106 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 MIR578-201ENST00000384828 96 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-460P-201ENST00000391158 108 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 AC010631.1-201ENST00000474150 156 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 AC107027.2-201ENST00000512197 115 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 RNU7-175P-201ENST00000515915 61 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 Y_RNA.797-201ENST00000515977 94 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 RNU6-347P-201ENST00000516658 105 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 MIR4429-201ENST00000580105 73 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 AC067852.3-201ENST00000589177 561 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 RPL23AP88-201ENST00000605759 454 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 AC005046.1-201ENST00000608515 625 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 uc_338.13-201ENST00000618243 179 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 MIR8059-201ENST00000620427 81 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 AP001340.1-201ENST00000624405 217 ntBASIC5.65□□□□□ -1.5
PDZRN3Q9UPQ7 AC139769.1-204ENST00000472297 1931 ntBASIC5.65□□□□□ -1.51
PDZRN3Q9UPQ7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDZRN3Q9UPQ7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.65□□□□□ -1.51
PDZRN3Q9UPQ7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDZRN3Q9UPQ7 OR51H2P-202ENST00000641424 3046 ntBASIC5.65□□□□□ -1.51
PDZRN3Q9UPQ7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDZRN3Q9UPQ7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 AL592437.2-201ENST00000421655 2434 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 AC015813.6-201ENST00000624409 5808 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 AC007685.1-201ENST00000329806 452 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 MIR383-201ENST00000362257 73 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 Y_RNA.324-201ENST00000365165 102 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 Y_RNA.570-201ENST00000384750 101 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 SNORA40.5-201ENST00000391061 128 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 SNORA11F-201ENST00000408237 128 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 RNU6-628P-201ENST00000410675 107 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 RNA5SP146-201ENST00000410743 123 ntBASIC5.64□□□□□ -1.51
PDZRN3Q9UPQ7 WARS2P1-201ENST00000429678 537 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms