Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNA5SP388-201ENST00000362584 119 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 GNG5P2-201ENST00000372054 207 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 Y_RNA.593-201ENST00000410292 98 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 AC099548.1-201ENST00000421443 426 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 RPL23AP1-201ENST00000428990 471 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 RPL37P4-201ENST00000448908 268 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 RPL23AP62-201ENST00000463396 453 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 TRBV5-2-201ENST00000489095 273 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 AL035690.1-201ENST00000490892 383 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 RPL23AP54-201ENST00000495129 419 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 RNU6-365P-201ENST00000517113 106 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 AC090897.2-201ENST00000581715 130 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 MIR4270-201ENST00000581799 70 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 AL049861.1-201ENST00000603130 150 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 AC000095.2-202ENST00000637415 154 ntBASIC5.25□□□□□ -1.57
LHX6Q9UPM6 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LHX6Q9UPM6 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 AC239868.2-201ENST00000564237 4527 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 U3.8-201ENST00000363675 217 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 Y_RNA.634-201ENST00000364811 113 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 Y_RNA.342-201ENST00000365352 113 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 DYNLT3P1-201ENST00000378574 347 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 RNU1-73P-201ENST00000383971 164 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 RNA5SP91-201ENST00000390902 119 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 RNA5SP339-201ENST00000390987 122 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 RPL21P129-201ENST00000491732 478 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 AC108022.1-201ENST00000493466 478 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 AC026402.1-201ENST00000513642 170 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 AC012616.1-201ENST00000600294 197 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 AC005562.2-201ENST00000618264 111 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 AC018692.3-201ENST00000623929 123 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
LHX6Q9UPM6 AC125336.1-201ENST00000508893 2827 ntBASIC5.24□□□□□ -1.57
LHX6Q9UPM6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 RNU1-75P-201ENST00000347264 129 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 SNORD1C-201ENST00000363315 78 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 RNA5SP505-201ENST00000364748 108 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 RNU6-622P-201ENST00000384272 103 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 EI24P2-201ENST00000397776 1076 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 SNORA11.2-201ENST00000408318 127 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 AC009237.10-201ENST00000414112 510 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 COX6B1P1-201ENST00000415962 213 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 SRIP1-201ENST00000489235 288 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 MTND6P33-201ENST00000571794 183 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 MIR5009-201ENST00000578736 100 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 MIR132-201ENST00000591554 101 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 FTX_3.1-201ENST00000610451 147 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 AC091905.4-201ENST00000623432 202 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.23□□□□□ -1.57
LHX6Q9UPM6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LHX6Q9UPM6 AC015813.6-201ENST00000624409 5808 ntBASIC5.22□□□□□ -1.57
LHX6Q9UPM6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LHX6Q9UPM6 AC007256.1-201ENST00000392253 2765 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms