Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.44□□□□□ -2.02
RNF41Q9H4P4 IGKV3-31-201ENST00000523109 329 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC084851.1-201ENST00000529105 249 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.44□□□□□ -2.02
RNF41Q9H4P4 PRELID2P1-201ENST00000552837 301 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC245014.2-201ENST00000603689 287 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 BNIP3P9-201ENST00000603714 553 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC246785.4-201ENST00000605374 287 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC109347.2-201ENST00000610220 349 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC048344.4-201ENST00000619744 527 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC068880.5-201ENST00000624331 290 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC008669.1-201ENST00000565823 2178 ntBASIC2.44□□□□□ -2.02
RNF41Q9H4P4 AC103710.2-202ENST00000641454 2853 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 RNU6-61P-201ENST00000365528 109 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 RNU2-68P-201ENST00000410878 191 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AL445646.1-201ENST00000431784 216 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 RPL23AP30-201ENST00000432419 501 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 RPL36AP53-201ENST00000432891 316 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AL591212.2-201ENST00000433923 257 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 RPS15AP9-201ENST00000439856 381 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC093899.1-201ENST00000457984 376 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 KLF3P2-201ENST00000465138 268 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 IGLV3-17-201ENST00000519099 244 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC103810.1-201ENST00000579873 453 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.43□□□□□ -2.02
RNF41Q9H4P4 MIR15A-201ENST00000607334 83 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AL161734.1-201ENST00000609720 557 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC136475.10-201ENST00000620253 385 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 AC093648.1-201ENST00000623546 606 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 Z99571.1-201ENST00000636677 394 ntBASIC2.43□□□□□ -2.02
RNF41Q9H4P4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC080100.1-201ENST00000624239 5356 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 Z82209.1-201ENST00000422141 2135 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC026241.1-201ENST00000517873 2142 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 MTND4P35-201ENST00000604257 1375 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 RNU6-181P-201ENST00000363225 107 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 RNY1P12-201ENST00000364251 105 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 RNU6-108P-201ENST00000365558 107 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 RNU6-1119P-201ENST00000384349 108 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 BTF3L4P1-201ENST00000413813 468 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 OOSP1P1-201ENST00000423265 274 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 MTCO3P5-201ENST00000433620 714 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC132479.1-201ENST00000449160 144 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC105313.1-201ENST00000509121 353 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 RNU6-677P-201ENST00000516914 101 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 RNU6-445P-201ENST00000516949 107 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC121758.2-201ENST00000553271 193 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 MYL12BP1-201ENST00000569826 507 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC008521.1-201ENST00000587471 187 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 MIR98-201ENST00000606724 119 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF41Q9H4P4 ZNF355P-201ENST00000427301 3216 ntBASIC2.42□□□□□ -2.02
RNF41Q9H4P4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 NACAP2-201ENST00000318548 624 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 Z98749.2-208ENST00000381646 500 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 SNORA75B-201ENST00000384053 137 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 NDUFS5P4-201ENST00000412983 318 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 MTCO2P11-201ENST00000431069 680 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC025033.1-201ENST00000463883 194 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 RPL23AP70-201ENST00000483361 460 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC117522.1-201ENST00000509821 380 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC108078.2-201ENST00000510750 236 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 SNORD27.1-201ENST00000516319 72 ntBASIC2.41□□□□□ -2.02
RNF41Q9H4P4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.41□□□□□ -2.02
RNF41Q9H4P4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms