Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.01□□□□□ -1.93
SKA1Q96BD8 AL365400.1-201ENST00000431854 640 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 AL360221.1-201ENST00000445989 335 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 RPL7P12-201ENST00000446719 750 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 MTND1P18-201ENST00000448191 573 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 AL162395.1-201ENST00000457882 422 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 RPS29P15-201ENST00000458329 171 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 AC112771.1-201ENST00000463581 102 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 AC079382.1-201ENST00000493346 557 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.01□□□□□ -1.93
SKA1Q96BD8 AC079598.5-201ENST00000547460 117 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 RN7SKP299-201ENST00000606679 301 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 AC024581.2-201ENST00000619986 252 ntBASIC3.01□□□□□ -1.93
SKA1Q96BD8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
SKA1Q96BD8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3□□□□□ -1.93
SKA1Q96BD8 HAUS6P2-201ENST00000433254 2404 ntBASIC3□□□□□ -1.93
SKA1Q96BD8 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3□□□□□ -1.93
SKA1Q96BD8 OR56A5-201ENST00000340110 738 ntBASIC3□□□□□ -1.93
SKA1Q96BD8 VTRNA1-1-201ENST00000363120 99 ntBASIC3□□□□□ -1.93
SKA1Q96BD8 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3□□□□□ -1.93
SKA1Q96BD8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3□□□□□ -1.93
SKA1Q96BD8 RPS3AP44-201ENST00000425466 790 ntBASIC3□□□□□ -1.93
SKA1Q96BD8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3□□□□□ -1.93
SKA1Q96BD8 MTCO2P11-201ENST00000431069 680 ntBASIC3□□□□□ -1.93
SKA1Q96BD8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3□□□□□ -1.93
SKA1Q96BD8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3□□□□□ -1.93
SKA1Q96BD8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3□□□□□ -1.93
SKA1Q96BD8 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3□□□□□ -1.93
SKA1Q96BD8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3□□□□□ -1.93
SKA1Q96BD8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3□□□□□ -1.93
SKA1Q96BD8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3□□□□□ -1.93
SKA1Q96BD8 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3□□□□□ -1.93
SKA1Q96BD8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3□□□□□ -1.93
SKA1Q96BD8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3□□□□□ -1.93
SKA1Q96BD8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3□□□□□ -1.93
SKA1Q96BD8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3□□□□□ -1.93
SKA1Q96BD8 RSL24D1P11-201ENST00000591045 491 ntBASIC3□□□□□ -1.93
SKA1Q96BD8 AC024153.1-201ENST00000603103 365 ntBASIC3□□□□□ -1.93
SKA1Q96BD8 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3□□□□□ -1.93
SKA1Q96BD8 HMGB1P24-202ENST00000615653 685 ntBASIC3□□□□□ -1.93
SKA1Q96BD8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3□□□□□ -1.93
SKA1Q96BD8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3□□□□□ -1.93
SKA1Q96BD8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SKA1Q96BD8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
SKA1Q96BD8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3□□□□□ -1.93
SKA1Q96BD8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC073325.2-201ENST00000339545 159 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 RNU6-1120P-201ENST00000362988 108 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 SNORD67-201ENST00000390833 111 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AL133475.1-201ENST00000404414 305 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 PGBD4P6-201ENST00000421501 610 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC000111.3-201ENST00000433478 193 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 GSTA11P-201ENST00000452866 669 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 GMFBP1-201ENST00000467831 427 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC006512.1-201ENST00000468816 291 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC010486.1-201ENST00000511793 424 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 SMURF2P1-201ENST00000514992 481 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 SNORA25.11-201ENST00000515935 105 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 RPL7P20-201ENST00000520308 745 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 GTF3AP2-201ENST00000557014 266 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 RPS15AP11-201ENST00000594193 385 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC008536.2-201ENST00000607284 349 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 RMST_4.1-201ENST00000616886 107 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC026585.1-201ENST00000619582 524 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.99□□□□□ -1.93
SKA1Q96BD8 AC006020.1-201ENST00000420179 1854 ntBASIC2.99□□□□□ -1.93
SKA1Q96BD8 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SKA1Q96BD8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SKA1Q96BD8 SNORD114-19-201ENST00000363072 75 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 RNU6-384P-201ENST00000364900 104 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 SNORA54-201ENST00000384281 123 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 SNORD116-1-201ENST00000384335 95 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 RNU6-45P-201ENST00000384471 107 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 SNORD88.1-201ENST00000408684 91 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 CDK8P2-201ENST00000415020 547 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 MTATP6P18-201ENST00000417994 673 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 AC138623.1-201ENST00000418060 216 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.98□□□□□ -1.93
SKA1Q96BD8 CALM1P1-201ENST00000442082 433 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA1Q96BD8 AC074344.1-201ENST00000512823 224 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 Y_RNA.687-201ENST00000516558 91 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 AC135279.1-201ENST00000543493 504 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 CR383656.8-201ENST00000549046 145 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 MIR4703-201ENST00000577728 79 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA1Q96BD8 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA1Q96BD8 BNIP3P30-201ENST00000601184 574 ntBASIC2.98□□□□□ -1.93
SKA1Q96BD8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.98□□□□□ -1.93
SKA1Q96BD8 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms