Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPL7P42-201ENST00000481005 679 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AL160314.1-201ENST00000490836 438 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 HMGB1P30-201ENST00000492455 606 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.99□□□□□ -1.77
ERCC4Q92889 RNU6-143P-201ENST00000516942 93 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.99□□□□□ -1.77
ERCC4Q92889 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.99□□□□□ -1.77
ERCC4Q92889 RNU6-988P-201ENST00000519081 107 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.99□□□□□ -1.77
ERCC4Q92889 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
ERCC4Q92889 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.99□□□□□ -1.77
ERCC4Q92889 AC074050.1-201ENST00000563247 211 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.99□□□□□ -1.77
ERCC4Q92889 AC034105.4-201ENST00000568304 277 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 MIR5187-201ENST00000583479 76 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AC011494.1-201ENST00000596454 237 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 RNU6-85P-201ENST00000605989 107 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 AP002826.1-201ENST00000608835 315 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 SNORD39.4-201ENST00000620099 78 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
ERCC4Q92889 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.99□□□□□ -1.77
ERCC4Q92889 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ERCC4Q92889 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ERCC4Q92889 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.99□□□□□ -1.77
ERCC4Q92889 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ERCC4Q92889 AC007256.1-201ENST00000392253 2765 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ERCC4Q92889 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.98□□□□□ -1.77
ERCC4Q92889 AL161912.2-201ENST00000565707 3007 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 AL079305.1-201ENST00000623159 3008 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ERCC4Q92889 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.98□□□□□ -1.77
ERCC4Q92889 Y_RNA.252-201ENST00000364556 101 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 RNA5SP51-201ENST00000364750 119 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 RNU6-384P-201ENST00000364900 104 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 DEFB109C-201ENST00000382575 264 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 DEFB109B-201ENST00000382656 264 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 Y_RNA.473-201ENST00000384333 102 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 RNU6-1179P-201ENST00000384667 107 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 U3.39-201ENST00000408569 239 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 RN7SKP53-201ENST00000411337 315 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 AL158156.1-201ENST00000422509 473 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 AC236972.1-201ENST00000433225 199 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.98□□□□□ -1.77
ERCC4Q92889 NDUFB1P2-201ENST00000449477 176 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 HMGN2P16-201ENST00000456802 261 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 AC092185.1-201ENST00000491371 97 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 MIR892C-201ENST00000516410 77 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 RN7SKP295-201ENST00000517264 153 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ERCC4Q92889 AC011602.1-201ENST00000546484 331 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.98□□□□□ -1.77
ERCC4Q92889 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.98□□□□□ -1.77
ERCC4Q92889 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 AP000942.4-201ENST00000604811 241 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 PISRT1.1-201ENST00000616930 107 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 AC091925.1-201ENST00000623204 462 ntBASIC3.98□□□□□ -1.77
ERCC4Q92889 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.98□□□□□ -1.77
ERCC4Q92889 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC4Q92889 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC4Q92889 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC4Q92889 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC4Q92889 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC4Q92889 AP000567.1-201ENST00000406413 156 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 RNU6ATAC-201ENST00000408749 126 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 RN7SKP27-201ENST00000410684 333 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 RNU6-293P-201ENST00000411259 106 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 AL592148.1-201ENST00000413568 445 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 USP9YP30-201ENST00000430729 455 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 AC007389.2-201ENST00000434630 306 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.97□□□□□ -1.77
ERCC4Q92889 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.97□□□□□ -1.77
ERCC4Q92889 PTP4A1P4-201ENST00000512479 322 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.97□□□□□ -1.77
ERCC4Q92889 AC009902.1-201ENST00000519351 183 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.97□□□□□ -1.77
ERCC4Q92889 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.97□□□□□ -1.77
ERCC4Q92889 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.97□□□□□ -1.77
ERCC4Q92889 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.97□□□□□ -1.77
ERCC4Q92889 AC092608.2-201ENST00000624427 218 ntBASIC3.97□□□□□ -1.77
ERCC4Q92889 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
ERCC4Q92889 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC4Q92889 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC4Q92889 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ERCC4Q92889 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ERCC4Q92889 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ERCC4Q92889 SNORD9-201ENST00000362566 104 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 AC117470.1-201ENST00000381974 330 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 RNU6-741P-201ENST00000383889 107 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 RNU6-1032P-201ENST00000384100 107 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 RNU6-306P-201ENST00000384617 107 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 SNORD73A-201ENST00000386062 65 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 RNU6-55P-201ENST00000411092 107 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 MCFD2P1-201ENST00000417812 300 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 MTND3P2-201ENST00000438452 342 ntBASIC3.96□□□□□ -1.78
ERCC4Q92889 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.96□□□□□ -1.78
ERCC4Q92889 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.96□□□□□ -1.78
ERCC4Q92889 RPS23P3-201ENST00000470993 430 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms