Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 Y_RNA.136-201ENST00000363444 102 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 Y_RNA.217-201ENST00000364214 105 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 RNA5SP130-201ENST00000364431 114 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 RNU6-514P-201ENST00000384208 107 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 Y_RNA.534-201ENST00000384599 112 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 RNU6-146P-201ENST00000384602 108 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 RNU6-817P-201ENST00000391083 104 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 MIR1193-201ENST00000408109 78 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 RNU2-21P-201ENST00000410368 188 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 RPL23AP46-201ENST00000438548 490 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 MRPS10P1-201ENST00000448483 130 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 Y_RNA.641-201ENST00000459414 105 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 RNU6-659P-201ENST00000516454 104 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 RNU7-121P-201ENST00000516604 62 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 Y_RNA.706-201ENST00000516933 99 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 MIR2116-201ENST00000517221 80 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 AC100770.1-201ENST00000532310 322 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 AP004242.1-201ENST00000533701 349 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 AK6P2-201ENST00000549020 471 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 AC022655.2-201ENST00000577280 318 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 RMST_4.1-201ENST00000616886 107 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 AC112484.5-201ENST00000624189 228 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.91□□□□□ -1.62
NEDD1Q8NHV4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NEDD1Q8NHV4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
NEDD1Q8NHV4 LINC01355-201ENST00000566551 5444 ntBASIC4.9□□□□□ -1.62
NEDD1Q8NHV4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
NEDD1Q8NHV4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.9□□□□□ -1.62
NEDD1Q8NHV4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
NEDD1Q8NHV4 RNU1-15P-201ENST00000353977 144 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 MIR372-201ENST00000362225 67 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 RNU6-222P-201ENST00000362438 107 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 RNU4-56P-201ENST00000364700 142 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 ENSAP1-201ENST00000392855 326 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 AL096701.2-201ENST00000416920 238 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 EBAG9P1-201ENST00000418955 543 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 AC073901.1-201ENST00000462471 408 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 RPS29P27-201ENST00000463711 170 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 RN7SL604P-201ENST00000492589 296 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 SNORA25.12-201ENST00000516202 82 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 AC008694.2-201ENST00000517591 306 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 DEFB131C-201ENST00000528817 165 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 AC008749.1-201ENST00000597650 306 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 MIR6129-201ENST00000616087 109 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 MTND5P32-201ENST00000560711 1802 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 AC092435.4-201ENST00000623012 4159 ntBASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NEDD1Q8NHV4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 SPRR2C-201ENST00000290702 219 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 Y_RNA.75-201ENST00000362927 97 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 Y_RNA.309-201ENST00000365046 111 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 Y_RNA.357-201ENST00000365487 109 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 RNU6-827P-201ENST00000365553 106 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 RNU6-147P-201ENST00000383983 107 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 Y_RNA.542-201ENST00000384641 111 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 RNA5SP89-201ENST00000410300 108 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 AC009237.10-201ENST00000414112 510 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 AC063979.1-201ENST00000415539 377 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 RPL21P40-201ENST00000428586 483 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 RNU6-1218P-201ENST00000458990 108 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 RNU6-953P-201ENST00000459154 107 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 U8.21-201ENST00000459536 136 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 TOMM22P6-201ENST00000465035 409 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 AC010683.1-201ENST00000473673 378 ntBASIC4.89□□□□□ -1.63
NEDD1Q8NHV4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms