Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 MIR4782-201ENST00000577987 79 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AC002545.1-201ENST00000592511 181 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AC048347.1-201ENST00000624621 427 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AL138820.1-201ENST00000617901 5305 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 MAPK10-304ENST00000641341 3984 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AC126323.6-202ENST00000568092 3511 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 SNORD14B-201ENST00000364533 90 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNA5SP509-201ENST00000364577 119 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNA5SP223-201ENST00000365174 120 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNU6-356P-201ENST00000384140 107 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNU6-1145P-201ENST00000384246 107 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNU6-768P-201ENST00000384683 107 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 Y_RNA.572-201ENST00000384757 98 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 MIR23B-201ENST00000384832 97 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 MIR548A3-201ENST00000385297 97 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNU6-763P-201ENST00000390865 106 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNU6-712P-201ENST00000410558 100 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 EIF4A1P3-201ENST00000411521 244 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 AL162591.2-201ENST00000449634 317 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 AC104164.2-201ENST00000496953 495 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNU6-453P-201ENST00000516819 85 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNA5SP471-201ENST00000516971 106 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 MIR3939-201ENST00000582614 106 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 AC022726.1-201ENST00000587475 207 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 AC062037.1-201ENST00000605302 128 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 AL357075.2-201ENST00000614906 189 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 AL773545.4-201ENST00000637262 310 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 AL513478.4-201ENST00000641636 310 ntBASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.12□□□□□ -1.59
CTC1Q2NKJ3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 Y_RNA.101-201ENST00000363154 102 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 RNU6-49P-201ENST00000384256 107 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 MIR153-1-201ENST00000384914 90 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 MIR134-201ENST00000385258 73 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 MIR301A-201ENST00000385261 86 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 CYCSP49-201ENST00000420810 319 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 CKS1BP5-201ENST00000434172 273 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 AL714022.1-201ENST00000439897 151 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 AF186996.7-201ENST00000492781 209 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 AC073073.1-201ENST00000493920 463 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 AL353748.2-201ENST00000622148 471 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 AC000123.3-201ENST00000624029 4975 ntBASIC5.11□□□□□ -1.59
CTC1Q2NKJ3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
CTC1Q2NKJ3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms