Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHRNA4P43681 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHRNA4P43681 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHRNA4P43681 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHRNA4P43681 A2MP1-204ENST00000566278 4130 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CHRNA4P43681 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CHRNA4P43681 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.51□□□□□ -1.69
CHRNA4P43681 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHRNA4P43681 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHRNA4P43681 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CHRNA4P43681 RNU4-80P-201ENST00000363200 141 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 RNU1-20P-201ENST00000363314 162 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 SNORD73B-201ENST00000364394 72 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 RNU6-395P-201ENST00000365662 106 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CHRNA4P43681 RNU6-339P-201ENST00000384310 107 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 RNA5SP332-201ENST00000391063 115 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 RNU6-381P-201ENST00000391259 108 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 BTF3P11-201ENST00000426582 477 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 AL451062.2-201ENST00000427515 271 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 AC090774.1-201ENST00000435925 246 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.51□□□□□ -1.69
CHRNA4P43681 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.51□□□□□ -1.69
CHRNA4P43681 AC096638.1-201ENST00000444678 216 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 EIF4A1P11-201ENST00000451239 222 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.51□□□□□ -1.69
CHRNA4P43681 RN7SL738P-201ENST00000470264 297 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 RN7SL481P-201ENST00000477764 299 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 FTH1P24-201ENST00000503502 462 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 NDUFA5P6-201ENST00000542110 379 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.51□□□□□ -1.69
CHRNA4P43681 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.51□□□□□ -1.69
CHRNA4P43681 RN7SL52P-201ENST00000584271 284 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.51□□□□□ -1.69
CHRNA4P43681 AL450472.3-201ENST00000615578 367 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 RN7SL722P-201ENST00000617780 284 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 RN7SL565P-201ENST00000618246 284 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 MIR6891-201ENST00000618788 93 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 AP000346.3-201ENST00000622821 210 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 U4.7-201ENST00000638126 106 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CHRNA4P43681 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CHRNA4P43681 LINC01109-201ENST00000603837 3081 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 AC090971.4-201ENST00000560291 1800 ntBASIC4.51□□□□□ -1.69
CHRNA4P43681 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.51□□□□□ -1.69
CHRNA4P43681 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA4P43681 AC092435.4-201ENST00000623012 4159 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA4P43681 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
CHRNA4P43681 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA4P43681 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA4P43681 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA4P43681 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA4P43681 Y_RNA.337-201ENST00000365312 102 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 MIR135A2-201ENST00000384854 100 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 SNORA11-201ENST00000408789 128 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 RNU6-603P-201ENST00000411403 107 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 AL592045.1-201ENST00000429867 352 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.5□□□□□ -1.69
CHRNA4P43681 RPS20P10-201ENST00000451209 253 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 AC005042.3-201ENST00000453230 174 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.5□□□□□ -1.69
CHRNA4P43681 APOOP4-201ENST00000513530 597 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 AC100767.1-201ENST00000528178 123 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CHRNA4P43681 U7.2-201ENST00000607576 63 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 uc_338.18-201ENST00000615451 175 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CHRNA4P43681 NCAPGP1-201ENST00000505112 1814 ntBASIC4.5□□□□□ -1.69
CHRNA4P43681 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CHRNA4P43681 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.5□□□□□ -1.69
CHRNA4P43681 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CHRNA4P43681 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.5□□□□□ -1.69
CHRNA4P43681 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.49□□□□□ -1.69
CHRNA4P43681 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.49□□□□□ -1.69
CHRNA4P43681 Y_RNA.33-201ENST00000362591 102 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 RNU6-428P-201ENST00000362942 107 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 Y_RNA.116-201ENST00000363292 103 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 RNU6-578P-201ENST00000390980 103 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 SDHCP2-201ENST00000398565 501 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 RPS20P14-201ENST00000412545 360 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 RPL23AP1-201ENST00000428990 471 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 COX6B1P7-201ENST00000430845 235 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 AC091390.1-201ENST00000433904 331 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 RPS15AP5-201ENST00000436276 388 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 RPS29P33-201ENST00000456717 146 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 RN7SL817P-201ENST00000480777 288 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 RPL23AP75-201ENST00000491601 451 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA4P43681 RN7SKP164-201ENST00000516138 266 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA4P43681 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.49□□□□□ -1.69
CHRNA4P43681 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.49□□□□□ -1.69
CHRNA4P43681 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.49□□□□□ -1.69
CHRNA4P43681 AC022968.1-201ENST00000567372 442 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.49□□□□□ -1.69
CHRNA4P43681 AC005176.2-201ENST00000596933 147 ntBASIC4.49□□□□□ -1.69
CHRNA4P43681 AC008121.1-201ENST00000603244 268 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms