Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNORD73A-201ENST00000386062 65 ntBASIC4.84□□□□□ -1.63
RXRBP28702 HDGFP1-201ENST00000405943 252 ntBASIC4.84□□□□□ -1.63
RXRBP28702 MYL8P-204ENST00000431574 518 ntBASIC4.84□□□□□ -1.63
RXRBP28702 AC004383.1-201ENST00000438135 289 ntBASIC4.84□□□□□ -1.63
RXRBP28702 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.84□□□□□ -1.63
RXRBP28702 HMGB1P37-201ENST00000439613 609 ntBASIC4.84□□□□□ -1.63
RXRBP28702 AC008264.1-201ENST00000447612 367 ntBASIC4.84□□□□□ -1.63
RXRBP28702 PCMTD1P1-201ENST00000455560 355 ntBASIC4.84□□□□□ -1.63
RXRBP28702 AC010469.1-201ENST00000463864 576 ntBASIC4.84□□□□□ -1.63
RXRBP28702 RPL23AP65-201ENST00000475608 468 ntBASIC4.84□□□□□ -1.63
RXRBP28702 MED28P2-201ENST00000475771 317 ntBASIC4.84□□□□□ -1.63
RXRBP28702 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.84□□□□□ -1.63
RXRBP28702 AC098869.1-201ENST00000481627 292 ntBASIC4.84□□□□□ -1.63
RXRBP28702 YWHAEP4-201ENST00000505390 198 ntBASIC4.84□□□□□ -1.63
RXRBP28702 RNU6-255P-201ENST00000516957 105 ntBASIC4.84□□□□□ -1.63
RXRBP28702 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.84□□□□□ -1.63
RXRBP28702 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.84□□□□□ -1.63
RXRBP28702 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.84□□□□□ -1.63
RXRBP28702 AC174048.1-201ENST00000603389 144 ntBASIC4.84□□□□□ -1.63
RXRBP28702 MIR7154-201ENST00000620673 73 ntBASIC4.84□□□□□ -1.63
RXRBP28702 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
RXRBP28702 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RXRBP28702 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RXRBP28702 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RXRBP28702 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.84□□□□□ -1.64
RXRBP28702 AL049555.1-201ENST00000562834 1933 ntBASIC4.84□□□□□ -1.64
RXRBP28702 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RXRBP28702 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RXRBP28702 AL359893.1-201ENST00000447628 1580 ntBASIC4.83□□□□□ -1.64
RXRBP28702 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.83□□□□□ -1.64
RXRBP28702 AC027287.1-201ENST00000553115 1453 ntBASIC4.83□□□□□ -1.64
RXRBP28702 RNU6-280P-201ENST00000364145 104 ntBASIC4.83□□□□□ -1.64
RXRBP28702 RNU4-50P-201ENST00000364361 141 ntBASIC4.83□□□□□ -1.64
RXRBP28702 RNU6-611P-201ENST00000384276 104 ntBASIC4.83□□□□□ -1.64
RXRBP28702 SNORA44-201ENST00000384584 132 ntBASIC4.83□□□□□ -1.64
RXRBP28702 RNU6-1203P-201ENST00000410703 110 ntBASIC4.83□□□□□ -1.64
RXRBP28702 AL160275.3-201ENST00000423876 471 ntBASIC4.83□□□□□ -1.64
RXRBP28702 AL139109.1-201ENST00000455491 297 ntBASIC4.83□□□□□ -1.64
RXRBP28702 AC018437.1-201ENST00000492214 406 ntBASIC4.83□□□□□ -1.64
RXRBP28702 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.83□□□□□ -1.64
RXRBP28702 IGLVIV-53-201ENST00000520107 367 ntBASIC4.83□□□□□ -1.64
RXRBP28702 HMGN1P28-201ENST00000521340 364 ntBASIC4.83□□□□□ -1.64
RXRBP28702 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.83□□□□□ -1.64
RXRBP28702 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.83□□□□□ -1.64
RXRBP28702 AC006023.2-201ENST00000609916 167 ntBASIC4.83□□□□□ -1.64
RXRBP28702 MIR4496-201ENST00000635896 61 ntBASIC4.83□□□□□ -1.64
RXRBP28702 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.83□□□□□ -1.64
RXRBP28702 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RXRBP28702 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.83□□□□□ -1.64
RXRBP28702 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RXRBP28702 AL592437.2-201ENST00000421655 2434 ntBASIC4.82□□□□□ -1.64
RXRBP28702 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RXRBP28702 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RXRBP28702 Y_RNA.84-201ENST00000363011 104 ntBASIC4.82□□□□□ -1.64
RXRBP28702 RNVU1-3-201ENST00000364313 161 ntBASIC4.82□□□□□ -1.64
RXRBP28702 SNORD113-1-201ENST00000365321 69 ntBASIC4.82□□□□□ -1.64
RXRBP28702 RNU6-190P-201ENST00000384154 102 ntBASIC4.82□□□□□ -1.64
RXRBP28702 RNU6-662P-201ENST00000384253 104 ntBASIC4.82□□□□□ -1.64
RXRBP28702 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.82□□□□□ -1.64
RXRBP28702 U3.42-201ENST00000408746 214 ntBASIC4.82□□□□□ -1.64
RXRBP28702 MIR548H3-201ENST00000408771 118 ntBASIC4.82□□□□□ -1.64
RXRBP28702 RNU2-25P-201ENST00000411041 191 ntBASIC4.82□□□□□ -1.64
RXRBP28702 RNU2-71P-201ENST00000411395 189 ntBASIC4.82□□□□□ -1.64
RXRBP28702 UBE2D3P2-201ENST00000424409 445 ntBASIC4.82□□□□□ -1.64
RXRBP28702 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.82□□□□□ -1.64
RXRBP28702 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.82□□□□□ -1.64
RXRBP28702 Z75741.1-201ENST00000446793 314 ntBASIC4.82□□□□□ -1.64
RXRBP28702 snoU109.4-201ENST00000458953 143 ntBASIC4.82□□□□□ -1.64
RXRBP28702 RNU7-169P-201ENST00000459456 61 ntBASIC4.82□□□□□ -1.64
RXRBP28702 IGKV2D-36-201ENST00000518643 226 ntBASIC4.82□□□□□ -1.64
RXRBP28702 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.82□□□□□ -1.64
RXRBP28702 MIR3133-201ENST00000583157 78 ntBASIC4.82□□□□□ -1.64
RXRBP28702 AC093732.2-201ENST00000607950 274 ntBASIC4.82□□□□□ -1.64
RXRBP28702 AC131238.1-201ENST00000617135 328 ntBASIC4.82□□□□□ -1.64
RXRBP28702 AL139811.1-201ENST00000424779 2299 ntBASIC4.82□□□□□ -1.64
RXRBP28702 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RXRBP28702 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RXRBP28702 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
RXRBP28702 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
RXRBP28702 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.82□□□□□ -1.64
RXRBP28702 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.82□□□□□ -1.64
RXRBP28702 USP8P1-201ENST00000494673 3183 ntBASIC4.81□□□□□ -1.64
RXRBP28702 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
RXRBP28702 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.81□□□□□ -1.64
RXRBP28702 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RXRBP28702 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RXRBP28702 Y_RNA.297-201ENST00000364950 91 ntBASIC4.81□□□□□ -1.64
RXRBP28702 RNU1-140P-201ENST00000365040 165 ntBASIC4.81□□□□□ -1.64
RXRBP28702 RNU6-339P-201ENST00000384310 107 ntBASIC4.81□□□□□ -1.64
RXRBP28702 Y_RNA.526-201ENST00000384572 110 ntBASIC4.81□□□□□ -1.64
RXRBP28702 AL030996.1-201ENST00000411430 235 ntBASIC4.81□□□□□ -1.64
RXRBP28702 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.81□□□□□ -1.64
RXRBP28702 RPEP5-201ENST00000441137 268 ntBASIC4.81□□□□□ -1.64
RXRBP28702 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.81□□□□□ -1.64
RXRBP28702 RNU7-4P-201ENST00000516961 62 ntBASIC4.81□□□□□ -1.64
RXRBP28702 AC103783.1-201ENST00000520506 373 ntBASIC4.81□□□□□ -1.64
RXRBP28702 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.81□□□□□ -1.64
RXRBP28702 CR383656.7-201ENST00000548164 174 ntBASIC4.81□□□□□ -1.64
RXRBP28702 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.81□□□□□ -1.64
RXRBP28702 MIR3162-201ENST00000581818 82 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms