Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 IPO5P1-202ENST00000600039 287 ntBASIC4.93□□□□□ -1.62
RFX1P22670 BPIFA4P-203ENST00000603168 689 ntBASIC4.93□□□□□ -1.62
RFX1P22670 AC091905.2-201ENST00000623143 306 ntBASIC4.93□□□□□ -1.62
RFX1P22670 AC034229.5-201ENST00000624258 185 ntBASIC4.93□□□□□ -1.62
RFX1P22670 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RFX1P22670 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RFX1P22670 ZNF826P-207ENST00000622273 1910 ntBASIC4.93□□□□□ -1.62
RFX1P22670 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.93□□□□□ -1.62
RFX1P22670 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RFX1P22670 AL353743.1-202ENST00000431724 1695 ntBASIC4.92□□□□□ -1.62
RFX1P22670 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFX1P22670 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX1P22670 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
RFX1P22670 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.92□□□□□ -1.62
RFX1P22670 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFX1P22670 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.92□□□□□ -1.62
RFX1P22670 RNU6-142P-201ENST00000384019 107 ntBASIC4.92□□□□□ -1.62
RFX1P22670 SNORA70C-201ENST00000384538 135 ntBASIC4.92□□□□□ -1.62
RFX1P22670 RNA5SP397-201ENST00000391323 118 ntBASIC4.92□□□□□ -1.62
RFX1P22670 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.92□□□□□ -1.62
RFX1P22670 BPY2DP-201ENST00000422208 265 ntBASIC4.92□□□□□ -1.62
RFX1P22670 RPEP3-201ENST00000425462 676 ntBASIC4.92□□□□□ -1.62
RFX1P22670 AL132765.1-201ENST00000434165 553 ntBASIC4.92□□□□□ -1.62
RFX1P22670 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.92□□□□□ -1.62
RFX1P22670 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFX1P22670 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX1P22670 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX1P22670 AC019159.1-201ENST00000605094 187 ntBASIC4.92□□□□□ -1.62
RFX1P22670 SDR42E1P4-201ENST00000620894 481 ntBASIC4.92□□□□□ -1.62
RFX1P22670 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RFX1P22670 U6.92-201ENST00000636464 89 ntBASIC4.92□□□□□ -1.62
RFX1P22670 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFX1P22670 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
RFX1P22670 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.92□□□□□ -1.62
RFX1P22670 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.92□□□□□ -1.62
RFX1P22670 NEAT1-202ENST00000501122 22743 ntBASIC4.91□□□□□ -1.62
RFX1P22670 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
RFX1P22670 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFX1P22670 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFX1P22670 RNU6-1280P-201ENST00000365211 107 ntBASIC4.91□□□□□ -1.62
RFX1P22670 Y_RNA.477-201ENST00000384352 108 ntBASIC4.91□□□□□ -1.62
RFX1P22670 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX1P22670 FTH1P15-201ENST00000406984 280 ntBASIC4.91□□□□□ -1.62
RFX1P22670 RNA5SP44-201ENST00000410446 133 ntBASIC4.91□□□□□ -1.62
RFX1P22670 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX1P22670 AC099548.1-201ENST00000421443 426 ntBASIC4.91□□□□□ -1.62
RFX1P22670 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.91□□□□□ -1.62
RFX1P22670 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX1P22670 AC009296.1-201ENST00000443146 155 ntBASIC4.91□□□□□ -1.62
RFX1P22670 AL353705.4-201ENST00000449661 238 ntBASIC4.91□□□□□ -1.62
RFX1P22670 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX1P22670 MTND4LP30-201ENST00000454092 297 ntBASIC4.91□□□□□ -1.62
RFX1P22670 RNA5SP310-201ENST00000459084 116 ntBASIC4.91□□□□□ -1.62
RFX1P22670 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.91□□□□□ -1.62
RFX1P22670 TOMM22P6-201ENST00000465035 409 ntBASIC4.91□□□□□ -1.62
RFX1P22670 MRPL42P6-201ENST00000486397 371 ntBASIC4.91□□□□□ -1.62
RFX1P22670 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.91□□□□□ -1.62
RFX1P22670 AC006445.2-201ENST00000510061 472 ntBASIC4.91□□□□□ -1.62
RFX1P22670 RNU6-928P-201ENST00000516876 104 ntBASIC4.91□□□□□ -1.62
RFX1P22670 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.91□□□□□ -1.62
RFX1P22670 SYF2P1-201ENST00000550658 413 ntBASIC4.91□□□□□ -1.62
RFX1P22670 AC021739.1-201ENST00000559631 174 ntBASIC4.91□□□□□ -1.62
RFX1P22670 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX1P22670 AC137590.2-201ENST00000619709 240 ntBASIC4.91□□□□□ -1.62
RFX1P22670 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.91□□□□□ -1.62
RFX1P22670 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX1P22670 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFX1P22670 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFX1P22670 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFX1P22670 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.9□□□□□ -1.62
RFX1P22670 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
RFX1P22670 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RFX1P22670 AF117829.1-206ENST00000621883 3802 ntBASIC4.9□□□□□ -1.62
RFX1P22670 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RFX1P22670 CPHL1P-201ENST00000461341 3407 ntBASIC4.9□□□□□ -1.62
RFX1P22670 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RFX1P22670 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.9□□□□□ -1.62
RFX1P22670 RNA5SP151-201ENST00000365632 117 ntBASIC4.9□□□□□ -1.63
RFX1P22670 Y_RNA.439-201ENST00000384119 94 ntBASIC4.9□□□□□ -1.63
RFX1P22670 Y_RNA.478-201ENST00000384358 107 ntBASIC4.9□□□□□ -1.63
RFX1P22670 RPS26P8-201ENST00000393490 348 ntBASIC4.9□□□□□ -1.63
RFX1P22670 RPS4XP3-201ENST00000398541 413 ntBASIC4.9□□□□□ -1.63
RFX1P22670 AL591034.1-201ENST00000407447 340 ntBASIC4.9□□□□□ -1.63
RFX1P22670 RNU2-25P-201ENST00000411041 191 ntBASIC4.9□□□□□ -1.63
RFX1P22670 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX1P22670 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX1P22670 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.9□□□□□ -1.63
RFX1P22670 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX1P22670 CKS1BP7-201ENST00000522230 235 ntBASIC4.9□□□□□ -1.63
RFX1P22670 AL391261.3-201ENST00000557194 520 ntBASIC4.9□□□□□ -1.63
RFX1P22670 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.9□□□□□ -1.63
RFX1P22670 AC106785.1-201ENST00000565935 262 ntBASIC4.9□□□□□ -1.63
RFX1P22670 AC012433.1-201ENST00000588916 398 ntBASIC4.9□□□□□ -1.63
RFX1P22670 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX1P22670 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX1P22670 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFX1P22670 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RFX1P22670 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RFX1P22670 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.9□□□□□ -1.63
RFX1P22670 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms