Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC116096.1-201ENST00000566804 2314 ntBASIC3.22□□□□□ -1.89
HOXC6P09630 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.22□□□□□ -1.89
HOXC6P09630 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
HOXC6P09630 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC6P09630 Y_RNA.301-201ENST00000364990 103 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC6P09630 RNU6-14P-201ENST00000384630 106 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 RNU6-882P-201ENST00000391025 103 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 AP000567.1-201ENST00000406413 156 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 U3.42-201ENST00000408746 214 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 AC245054.2-201ENST00000415639 319 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 TOMM22P1-201ENST00000418578 312 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 AL513328.1-201ENST00000446460 224 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 RPS3P1-201ENST00000456781 192 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 SCARNA18-201ENST00000459004 134 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 Y_RNA.632-201ENST00000459189 102 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 HMGB1P22-201ENST00000505315 124 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.21□□□□□ -1.9
HOXC6P09630 SCARNA15.1-201ENST00000516384 125 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 Y_RNA.689-201ENST00000516589 107 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 RNU6-1088P-201ENST00000516850 104 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 AL137161.1-201ENST00000532231 390 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC6P09630 OR4H12P-201ENST00000556269 907 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 AC012182.1-201ENST00000570133 895 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.21□□□□□ -1.9
HOXC6P09630 AC136601.2-201ENST00000604356 474 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 Z82243.1-201ENST00000609432 473 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXC6P09630 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC6P09630 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HOXC6P09630 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HOXC6P09630 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXC6P09630 ZNF826P-207ENST00000622273 1910 ntBASIC3.21□□□□□ -1.9
HOXC6P09630 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC6P09630 AP001350.1-201ENST00000601906 1524 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 TPTE2P4-201ENST00000258589 1605 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC6P09630 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC6P09630 RNA5SP432-201ENST00000362480 116 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 RNU6-288P-201ENST00000363690 104 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 RNU1-112P-201ENST00000364401 164 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 RNU6-1074P-201ENST00000383995 104 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 SNORA67.4-201ENST00000384688 142 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL139039.1-201ENST00000401900 692 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 MIR1261-201ENST00000408659 82 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC6P09630 RNU6-1304P-201ENST00000411374 106 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC6P09630 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC6P09630 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL121890.1-201ENST00000435457 205 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 RPL36AP6-201ENST00000435770 321 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.2□□□□□ -1.9
HOXC6P09630 NEFMP1-201ENST00000443423 1006 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC6P09630 RPS24P6-201ENST00000452670 400 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.2□□□□□ -1.9
HOXC6P09630 RNU7-66P-201ENST00000459469 62 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 RNU6-1208P-201ENST00000459588 107 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC6P09630 RPL23AP11-201ENST00000475260 469 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AC098591.2-201ENST00000510152 315 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 TBCAP3-201ENST00000512475 312 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 RNU1-41P-201ENST00000516161 162 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 RN7SKP43-201ENST00000516173 320 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 RNU1-48P-201ENST00000516400 162 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC6P09630 AC068657.1-201ENST00000520807 306 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.2□□□□□ -1.9
HOXC6P09630 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.2□□□□□ -1.9
HOXC6P09630 BNIP3P25-201ENST00000596023 559 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL670379.6-201ENST00000603753 252 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL670379.11-201ENST00000604059 253 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL670379.10-201ENST00000604330 253 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL670379.1-201ENST00000604752 252 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL670379.5-201ENST00000605253 252 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL670379.12-201ENST00000605291 253 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL670379.8-201ENST00000605353 252 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL670379.9-201ENST00000605428 253 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AL670379.7-201ENST00000605823 252 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 AC099778.2-201ENST00000610904 211 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 uc_338.15-201ENST00000615470 191 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
HOXC6P09630 AL160413.1-201ENST00000622780 310 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXC6P09630 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXC6P09630 AC009487.2-201ENST00000420969 6821 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.2□□□□□ -1.9
HOXC6P09630 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HOXC6P09630 AP003122.5-201ENST00000527668 3766 ntBASIC3.2□□□□□ -1.9
HOXC6P09630 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXC6P09630 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 Y_RNA.100-201ENST00000363141 102 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 Y_RNA.138-201ENST00000363462 102 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 RNU6-76P-201ENST00000384060 104 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 RNU4-14P-201ENST00000410858 122 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 RN7SKP58-201ENST00000411010 305 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 RNA5SP111-201ENST00000411386 101 ntBASIC3.19□□□□□ -1.9
HOXC6P09630 AL354751.2-201ENST00000415471 210 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms