Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.46□□□□□ -2.18
SCN2BO60939 RNU6-953P-201ENST00000459154 107 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.46□□□□□ -2.18
SCN2BO60939 RNU2-53P-201ENST00000516257 147 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 RNU6-64P-201ENST00000517119 105 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.46□□□□□ -2.18
SCN2BO60939 VN1R83P-201ENST00000595685 445 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 BNIP3P26-201ENST00000600827 554 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 AP001981.2-201ENST00000603241 418 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 AL670379.2-201ENST00000604983 252 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 AC016925.2-201ENST00000605108 242 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 AL670379.4-201ENST00000605279 254 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 AC090517.3-201ENST00000625170 141 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 AC233981.2-201ENST00000611524 1614 ntBASIC1.46□□□□□ -2.18
SCN2BO60939 MTND5P10-201ENST00000603719 1809 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 ZNF680P1-201ENST00000436625 1469 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
SCN2BO60939 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SCN2BO60939 RNU6-338P-201ENST00000383888 105 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 RNU6-546P-201ENST00000383991 107 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 SNORD14D-201ENST00000384390 87 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 SRIP3-201ENST00000413200 219 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2BO60939 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2BO60939 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2BO60939 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN2BO60939 RAC1P6-201ENST00000423911 575 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN2BO60939 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN2BO60939 HMGB1P18-201ENST00000438801 619 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN2BO60939 NEFMP1-201ENST00000443423 1006 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.45□□□□□ -2.18
SCN2BO60939 MTND1P16-201ENST00000465177 898 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.45□□□□□ -2.18
SCN2BO60939 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN2BO60939 RNU6-548P-201ENST00000517083 115 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 AC008507.2-201ENST00000588402 1176 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 AC093788.1-201ENST00000609356 927 ntBASIC1.45□□□□□ -2.18
SCN2BO60939 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SCN2BO60939 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.45□□□□□ -2.18
SCN2BO60939 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
SCN2BO60939 MTND5P33-201ENST00000571250 1450 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SCN2BO60939 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
SCN2BO60939 RNU6-529P-201ENST00000363383 104 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 SNORA40.2-201ENST00000390847 128 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 AC007098.1-201ENST00000420122 367 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN2BO60939 AL078601.1-201ENST00000444542 271 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 AC003071.1-201ENST00000451219 789 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 SNORA31.19-201ENST00000517079 126 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 AC009902.1-201ENST00000519351 183 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SCN2BO60939 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.44□□□□□ -2.18
SCN2BO60939 AC124016.2-201ENST00000610058 665 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 AC005858.4-201ENST00000623191 700 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 AC091965.5-201ENST00000624785 342 ntBASIC1.44□□□□□ -2.18
SCN2BO60939 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.44□□□□□ -2.18
SCN2BO60939 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SCN2BO60939 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SCN2BO60939 RNU1-58P-201ENST00000362413 163 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 RNU4-51P-201ENST00000364206 140 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 RNU6-621P-201ENST00000364752 109 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 RNA5SP190-201ENST00000365222 118 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 RNU2-48P-201ENST00000410694 191 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.43□□□□□ -2.18
SCN2BO60939 AC008267.5-201ENST00000424928 265 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AL513185.2-201ENST00000425543 193 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.43□□□□□ -2.18
SCN2BO60939 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.43□□□□□ -2.18
SCN2BO60939 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.43□□□□□ -2.18
SCN2BO60939 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.43□□□□□ -2.18
SCN2BO60939 AL360221.1-201ENST00000445989 335 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AP000542.1-201ENST00000448473 371 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 HMGN2P23-201ENST00000456759 269 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 PRELID3BP1-201ENST00000457142 540 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AC108729.1-201ENST00000487812 947 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AC021146.2-201ENST00000504736 556 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 PTP4A1P4-201ENST00000512479 322 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AC117532.1-201ENST00000514638 323 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 RNA5SP216-201ENST00000516111 123 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.43□□□□□ -2.18
SCN2BO60939 AP006587.4-201ENST00000526053 529 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AC093249.1-201ENST00000567049 203 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SCN2BO60939 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.43□□□□□ -2.18
SCN2BO60939 AC025811.1-201ENST00000604312 472 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AC010900.2-201ENST00000604508 210 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.43□□□□□ -2.18
SCN2BO60939 uc_338.15-201ENST00000615470 191 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AL512643.1-201ENST00000635735 524 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 MIR3529-201ENST00000637713 78 ntBASIC1.43□□□□□ -2.18
SCN2BO60939 AL161722.3-201ENST00000605789 2983 ntBASIC1.42□□□□□ -2.18
SCN2BO60939 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.42□□□□□ -2.18
SCN2BO60939 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SCN2BO60939 RNU6-661P-201ENST00000362409 107 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms