Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
RCCD1A6NED2 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCCD1A6NED2 PCAT14-202ENST00000627127 3935 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 MIR549A-201ENST00000385268 96 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AL355497.1-201ENST00000406262 551 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 RNU6-710P-201ENST00000410424 105 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC245028.1-201ENST00000423259 256 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC019205.3-201ENST00000424573 156 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AL354714.3-201ENST00000447284 493 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AL121914.1-201ENST00000450188 156 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC092991.1-201ENST00000477176 376 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.22□□□□□ -1.57
RCCD1A6NED2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC006499.6-201ENST00000511169 607 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC115990.1-201ENST00000526957 301 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC009163.5-201ENST00000575421 637 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AL391813.1-201ENST00000603098 260 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 SUMO2P15-201ENST00000604285 278 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 SNRPGP20-201ENST00000604477 205 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AC012468.1-201ENST00000604888 430 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 U7.2-201ENST00000607576 63 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AL391903.3-201ENST00000612158 163 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AL391261.4-201ENST00000616012 481 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 MIR6129-201ENST00000616087 109 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 AP002799.1-201ENST00000623552 423 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 MIR4679-1-201ENST00000637619 75 ntBASIC5.22□□□□□ -1.57
RCCD1A6NED2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.22□□□□□ -1.57
RCCD1A6NED2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCCD1A6NED2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RCCD1A6NED2 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RCCD1A6NED2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.21□□□□□ -1.57
RCCD1A6NED2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RCCD1A6NED2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RCCD1A6NED2 ADAM3A-203ENST00000461344 2157 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RCCD1A6NED2 RNU6-1280P-201ENST00000365211 107 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 RNU6-643P-201ENST00000384018 107 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 SNORA72.4-201ENST00000384174 132 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 RNU6-1144P-201ENST00000384247 104 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 RNU6-460P-201ENST00000391158 108 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 AL135790.2-201ENST00000437701 267 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 HMGB3P8-201ENST00000449709 577 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 OR2AO1P-201ENST00000476497 403 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.21□□□□□ -1.58
RCCD1A6NED2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.21□□□□□ -1.58
RCCD1A6NED2 SCARNA8-201ENST00000515924 131 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 RNA5SP76-201ENST00000516277 87 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 RNA5SP43-201ENST00000516559 110 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 RNU6-453P-201ENST00000516819 85 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 Y_RNA.709-201ENST00000516952 92 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 IGLV2-28-201ENST00000520681 304 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 AC090049.2-201ENST00000550377 109 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 SCARNA15-201ENST00000607520 4325 ntBASIC5.21□□□□□ -1.58
RCCD1A6NED2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RCCD1A6NED2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RCCD1A6NED2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.21□□□□□ -1.58
RCCD1A6NED2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RCCD1A6NED2 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
RCCD1A6NED2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 AC068700.1-201ENST00000565862 3754 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.2□□□□□ -1.58
RCCD1A6NED2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RCCD1A6NED2 SNORA17.1-201ENST00000362945 126 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 RNA5SP515-201ENST00000364570 118 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 RNU6-407P-201ENST00000365280 104 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 MIR124-3-201ENST00000384866 87 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 RNU6-1197P-201ENST00000391183 107 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.2□□□□□ -1.58
RCCD1A6NED2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RCCD1A6NED2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.2□□□□□ -1.58
RCCD1A6NED2 FCF1P8-201ENST00000510322 597 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 RN7SKP46-201ENST00000515942 234 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 RNU2-56P-201ENST00000516826 190 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.2□□□□□ -1.58
RCCD1A6NED2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.2□□□□□ -1.58
RCCD1A6NED2 MIR3613-201ENST00000579844 87 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 AL591034.3-201ENST00000605511 685 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 MIR6837-201ENST00000620884 64 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 AL023881.1-201ENST00000621088 301 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 AC005086.4-201ENST00000623065 213 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 MIR6844-201ENST00000637122 62 ntBASIC5.2□□□□□ -1.58
RCCD1A6NED2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCCD1A6NED2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
RCCD1A6NED2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RCCD1A6NED2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RCCD1A6NED2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms