Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 OR5B19P-201ENST00000531766 928 ntBASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 CBX3P8-201ENST00000532412 525 ntBASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 AC012213.3-201ENST00000577199 777 ntBASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 NDUFA8P1-201ENST00000605525 367 ntBASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 AC138627.2-201ENST00000624202 601 ntBASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV17A0A0B4J275 Y_RNA.67-201ENST00000362870 100 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 MIR618-201ENST00000385287 98 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 MIR1262-201ENST00000408276 93 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 TPMTP3-201ENST00000411928 735 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AL353706.1-201ENST00000436728 494 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AL022238.1-201ENST00000442557 355 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AC017099.1-201ENST00000448261 1028 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 RNA5SP57-201ENST00000459463 123 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AC013828.1-201ENST00000481845 158 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 SNORA25.11-201ENST00000515935 105 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AC103833.1-201ENST00000517442 172 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AL121821.2-201ENST00000556081 394 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AC002545.1-201ENST00000592511 181 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 BNIP3P27-201ENST00000599991 412 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 AL138713.1-201ENST00000624026 2130 ntBASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV17A0A0B4J275 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 RNU6-1164P-201ENST00000364428 107 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 MIR217-201ENST00000384817 110 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 SNORD65C-201ENST00000390962 71 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 TMSB4XP8-201ENST00000402089 135 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 TMSB4XP6-201ENST00000415187 135 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 MTCYBP38-201ENST00000417160 1123 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 TMSB4XP1-201ENST00000424567 135 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 MTND4LP16-201ENST00000440828 295 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 AC112492.4-201ENST00000456549 352 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 SNORA48.9-201ENST00000516419 162 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 AC019288.1-201ENST00000557918 224 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 AC233266.2-201ENST00000567067 528 ntBASIC0.79□□□□□ -2.28
TRAV17A0A0B4J275 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 RNU6-439P-201ENST00000384188 106 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 Y_RNA.540-201ENST00000384638 111 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 MIR597-201ENST00000384968 97 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 CBX3P6-201ENST00000430257 527 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AL591212.2-201ENST00000433923 257 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC002381.1-201ENST00000447049 280 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 CECR9-201ENST00000453421 199 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC092991.1-201ENST00000477176 376 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC093677.1-201ENST00000514414 678 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 RNA5SP384-201ENST00000516615 116 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 RNA5SP290-201ENST00000517133 127 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 RNU6-667P-201ENST00000517186 102 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC125611.1-201ENST00000549563 229 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 RPL21P5-201ENST00000554662 472 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC011451.2-201ENST00000604303 598 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 AC103810.9-201ENST00000606688 112 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 MIR8074-201ENST00000615081 81 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 RMST_10.1-201ENST00000616309 154 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.78□□□□□ -2.28
TRAV17A0A0B4J275 MIR302D-201ENST00000362275 68 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 RNU6-271P-201ENST00000363858 105 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 SNORA25.8-201ENST00000364831 128 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 RNU11-3P-201ENST00000391111 133 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 RPL22P22-201ENST00000395439 379 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 AL133264.1-201ENST00000407157 562 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 MTCO1P44-201ENST00000441935 243 ntBASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV17A0A0B4J275 AC013267.1-201ENST00000458227 267 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms