Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 MTND1P30-201ENST00000441241 901 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 MTND6P13-201ENST00000443510 523 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AP000936.2-201ENST00000447151 681 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 CYP2C59P-201ENST00000457790 269 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 SNORA84-201ENST00000459229 133 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 FAM133DP-201ENST00000464802 691 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AC026436.1-201ENST00000510537 270 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AC008749.1-201ENST00000597650 306 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL713866.2-201ENST00000603579 219 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AL158032.1-201ENST00000605401 106 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AC096772.1-201ENST00000609146 564 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AC012360.2-201ENST00000609349 391 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KCNIP3Q9Y2W7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RNU6-487P-201ENST00000365430 104 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RNU6-61P-201ENST00000365528 109 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RNU6-641P-201ENST00000384006 107 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 SNORD23.1-201ENST00000408212 104 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RN7SKP158-201ENST00000410453 326 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RN7SKP27-201ENST00000410684 333 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 SNORD109B-201ENST00000458961 67 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 SNORD109A-201ENST00000459128 67 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 FTH1P2-201ENST00000466086 412 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 MTAPP1-201ENST00000489154 819 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RNU7-193P-201ENST00000516723 65 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RNU6-759P-201ENST00000516740 103 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RNU1-40P-201ENST00000516816 164 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RNU1-97P-201ENST00000516872 164 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 RNU2-46P-201ENST00000517038 113 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 AP004607.1-201ENST00000524456 203 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 AC135279.1-201ENST00000543493 504 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 PSMA3P-201ENST00000555485 635 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 MTATP6P24-201ENST00000576835 677 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 DEFB131E-202ENST00000602581 683 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 AC122133.1-201ENST00000613964 233 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 AF246928.1-201ENST00000623768 87 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 AL157786.1-207ENST00000627771 695 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 MIR3529-201ENST00000637713 78 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 HAUS6P2-201ENST00000433254 2404 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 AC016717.2-201ENST00000609089 5141 ntBASIC1.91□□□□□ -2.1
KCNIP3Q9Y2W7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 RBBP8P1-201ENST00000449447 1844 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-858P-201ENST00000362436 107 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA20.2-201ENST00000383922 131 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-843P-201ENST00000384454 104 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA44-201ENST00000384584 132 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 EEF1A1P40-201ENST00000412883 573 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 MTND5P25-201ENST00000430499 799 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AL161788.1-201ENST00000441805 169 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 PSPHP1-201ENST00000450062 261 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 S100A11P2-201ENST00000467589 312 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AC140059.1-201ENST00000489238 361 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 HMGB1P30-201ENST00000492455 606 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 MTCYBP35-201ENST00000503630 1137 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AC117522.2-201ENST00000510049 657 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 SNORA48.11-201ENST00000517015 89 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 CYCSP26-201ENST00000534107 320 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 MIR548AB-201ENST00000584917 84 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AC005771.1-201ENST00000585581 349 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 BNIP3P30-201ENST00000601184 574 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AL355297.2-201ENST00000604792 129 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 BX323046.1-201ENST00000610145 535 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 AL161423.1-201ENST00000613700 262 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 MIR6075-201ENST00000620782 95 ntBASIC1.9□□□□□ -2.11
KCNIP3Q9Y2W7 MIR6766-201ENST00000622641 72 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms