Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 NDUFB1P2-201ENST00000449477 176 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 Y_RNA.635-201ENST00000459041 101 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 RN7SL542P-201ENST00000467147 294 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 HMGN1P13-201ENST00000505795 138 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 AC079140.5-201ENST00000507882 310 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 RNU1-103P-201ENST00000516502 125 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 SCARNA14-201ENST00000516903 136 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 AC107934.2-201ENST00000518653 310 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 H3F3AP1-201ENST00000559984 334 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 AL161756.2-201ENST00000604597 246 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 HSPE1P7-201ENST00000604681 321 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 ELOCP5-201ENST00000604924 333 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 RNU6-6P-201ENST00000606623 107 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 RNU4-89P-201ENST00000607443 133 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 AC073476.4-201ENST00000628409 72 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 AP001148.1-201ENST00000624124 2359 ntBASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
NKX1-2Q9UD57 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 RNU6-884P-201ENST00000363889 107 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 Y_RNA.259-201ENST00000364619 101 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 RNA5SP97-201ENST00000365006 84 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 Y_RNA.394-201ENST00000383942 103 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 RNU6-95P-201ENST00000384697 107 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 MIR7-3-201ENST00000384898 110 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AL360182.1-201ENST00000397433 468 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 RN7SKP53-201ENST00000411337 315 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC098614.2-201ENST00000426040 255 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 snoU109.2-201ENST00000459316 135 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC130509.1-201ENST00000464158 433 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 RN7SL594P-201ENST00000470590 287 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 RNA5SP164-201ENST00000516533 110 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 RNU6-703P-201ENST00000516946 107 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 IGHV3-76-201ENST00000522465 295 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC104576.1-201ENST00000524225 88 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC025884.1-201ENST00000556034 378 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AL133255.1-201ENST00000606374 441 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC064836.2-201ENST00000609491 462 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC114781.5-201ENST00000615297 108 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 MIR8059-201ENST00000620427 81 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AC091953.5-201ENST00000622919 233 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 U2.21-201ENST00000637295 81 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 AF117829.1-206ENST00000621883 3802 ntBASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX1-2Q9UD57 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 SNORA63.1-201ENST00000362493 131 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 RNU6-778P-201ENST00000363269 103 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 RNU6-1329P-201ENST00000365664 107 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 RNU6-1035P-201ENST00000384477 107 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 SNORD116-29-201ENST00000384516 83 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AC108032.1-201ENST00000416706 207 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AL078601.1-201ENST00000444542 271 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 SNORD19B-201ENST00000459623 84 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 HMGN1P11-201ENST00000508668 303 ntBASIC3.29□□□□□ -1.88
NKX1-2Q9UD57 AC010265.1-201ENST00000513509 211 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms