Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
BCAS3Q9H6U6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AL592437.2-201ENST00000421655 2434 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AL445529.1-201ENST00000398713 389 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC063979.1-201ENST00000415539 377 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC017079.2-201ENST00000416102 485 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 RPS15AP6-201ENST00000420703 385 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AP000907.1-201ENST00000428428 510 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AL356535.1-201ENST00000440335 398 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 RPL26P6-201ENST00000440913 438 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC018437.1-201ENST00000492214 406 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC113155.1-201ENST00000511141 769 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 RNU6-1023P-201ENST00000516137 106 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 RNU6-911P-201ENST00000516523 104 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 RNU6-840P-201ENST00000517275 65 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC104576.1-201ENST00000524225 88 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC005951.2-201ENST00000576282 495 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 BMS1P21-201ENST00000634565 365 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 AC006504.1-201ENST00000562493 3666 ntBASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BCAS3Q9H6U6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AC010733.2-201ENST00000589496 5702 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 LINC02471-203ENST00000641941 4752 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AC007656.2-201ENST00000624902 4547 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AC007685.1-201ENST00000329806 452 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 RNY1P16-201ENST00000363063 111 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.324-201ENST00000365165 102 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.461-201ENST00000384263 103 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 RNVU1-14-201ENST00000384770 164 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 SNORD73A-201ENST00000386062 65 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 MT-TW-201ENST00000387382 68 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AL591034.2-201ENST00000402839 359 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AL513331.1-201ENST00000411908 397 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AL031274.1-201ENST00000450334 232 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 RPS24P6-201ENST00000452670 400 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 SUMO2P6-201ENST00000505273 288 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 FTH1P9-201ENST00000513251 355 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 SNORA25.11-201ENST00000515935 105 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 ACA59.1-201ENST00000515966 143 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 Y_RNA.680-201ENST00000516441 93 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 IGHV3-76-201ENST00000522465 295 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AC008489.1-201ENST00000524271 483 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 CBX3P8-201ENST00000532412 525 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 MIR5701-3-201ENST00000578890 82 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 MIR5701-1-201ENST00000585138 82 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AP000787.2-201ENST00000604432 568 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AC006023.2-201ENST00000609916 167 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 AL355810.1-201ENST00000614629 552 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 MIR5701-2-201ENST00000615634 82 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 U6.104-201ENST00000637979 90 ntBASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.11□□□□□ -1.75
BCAS3Q9H6U6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AC010615.1-201ENST00000594254 1764 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 OR56A5-201ENST00000340110 738 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 MIR153-1-201ENST00000384914 90 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 HLFP1-201ENST00000402375 499 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 HSPE1P8-201ENST00000406997 288 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 MIR1302-6-201ENST00000408466 90 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 RN7SKP177-201ENST00000410567 355 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 ELOCP20-201ENST00000422460 345 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms