Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 AL078601.1-201ENST00000444542 271 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.31□□□□□ -2.2
MED28Q9H204 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.31□□□□□ -2.2
MED28Q9H204 AC087884.1-201ENST00000469738 328 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.31□□□□□ -2.2
MED28Q9H204 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.31□□□□□ -2.2
MED28Q9H204 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
MED28Q9H204 MTCYBP43-201ENST00000513621 740 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 RNA5SP182-201ENST00000516064 82 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.31□□□□□ -2.2
MED28Q9H204 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.31□□□□□ -2.2
MED28Q9H204 AC010376.1-201ENST00000522101 334 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 DUXAP5-201ENST00000529668 529 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MED28Q9H204 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.31□□□□□ -2.2
MED28Q9H204 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.31□□□□□ -2.2
MED28Q9H204 IMMP1LP2-201ENST00000552954 492 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.31□□□□□ -2.2
MED28Q9H204 AC022254.1-201ENST00000567857 235 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 MIR4713-201ENST00000582691 75 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.31□□□□□ -2.2
MED28Q9H204 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.31□□□□□ -2.2
MED28Q9H204 AC103810.8-201ENST00000607347 118 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 AL136981.2-201ENST00000617319 734 ntBASIC1.31□□□□□ -2.2
MED28Q9H204 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.31□□□□□ -2.2
MED28Q9H204 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
MED28Q9H204 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.31□□□□□ -2.2
MED28Q9H204 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
MED28Q9H204 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
MED28Q9H204 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
MED28Q9H204 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
MED28Q9H204 SNORD115-3-201ENST00000363100 82 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 SNORD116.1-201ENST00000365628 92 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 RNU6-166P-201ENST00000384371 107 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 Y_RNA.534-201ENST00000384599 112 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 MIR9-3-201ENST00000385084 90 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 MIR1304-201ENST00000408243 91 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 VN1R36P-201ENST00000414936 291 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 AC019070.1-201ENST00000415008 1024 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 VPS26BP1-201ENST00000417155 755 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.3□□□□□ -2.2
MED28Q9H204 EIF4EP2-201ENST00000422816 654 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 RAC1P6-201ENST00000423911 575 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC1.3□□□□□ -2.2
MED28Q9H204 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.3□□□□□ -2.2
MED28Q9H204 HMGN2P3-201ENST00000433603 273 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 HMGN2P5-201ENST00000436882 273 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
MED28Q9H204 AL357134.1-201ENST00000445848 426 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 FCF1P6-201ENST00000456841 595 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 RNU6-953P-201ENST00000459154 107 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 AC106872.3-201ENST00000495104 446 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.3□□□□□ -2.2
MED28Q9H204 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.3□□□□□ -2.2
MED28Q9H204 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.3□□□□□ -2.2
MED28Q9H204 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.3□□□□□ -2.2
MED28Q9H204 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.3□□□□□ -2.2
MED28Q9H204 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
MED28Q9H204 AC073410.2-201ENST00000603240 332 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 AP001981.2-201ENST00000603241 418 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 AC098614.4-201ENST00000607601 462 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 AL355472.4-201ENST00000610233 626 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 AC108479.2-201ENST00000617314 601 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 MTND5P42-201ENST00000637720 498 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.3□□□□□ -2.2
MED28Q9H204 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.3□□□□□ -2.2
MED28Q9H204 ZNF876P-202ENST00000398732 1485 ntBASIC1.3□□□□□ -2.2
MED28Q9H204 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
MED28Q9H204 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
MED28Q9H204 SNORA4.3-201ENST00000365564 137 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 Y_RNA.465-201ENST00000384293 102 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 MIR634-201ENST00000385208 97 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 MIR29C-201ENST00000385231 88 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 FCF1P10-201ENST00000407590 479 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 RN7SKP223-201ENST00000410582 62 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.29□□□□□ -2.2
MED28Q9H204 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.29□□□□□ -2.2
MED28Q9H204 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.29□□□□□ -2.2
MED28Q9H204 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.29□□□□□ -2.2
MED28Q9H204 AL591704.1-201ENST00000432574 275 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 LARP1BP3-201ENST00000437229 869 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 AL353705.4-201ENST00000449661 238 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 MTND1P3-201ENST00000484956 952 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 RPL9P6-201ENST00000492764 598 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
MED28Q9H204 RNU2-53P-201ENST00000516257 147 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 AC091163.3-201ENST00000518269 1144 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 AC093249.1-201ENST00000567049 203 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 AL356432.3-201ENST00000568952 465 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 MIR4255-201ENST00000579351 72 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 MIR4435-1-201ENST00000582552 80 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 CLIC4P2-201ENST00000601934 717 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 BCRP9-201ENST00000605312 388 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 RNU6-88P-201ENST00000606801 100 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 AC093788.1-201ENST00000609356 927 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.29□□□□□ -2.2
MED28Q9H204 AC091304.6-201ENST00000619761 202 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 AC092192.1-201ENST00000633154 1018 ntBASIC1.29□□□□□ -2.2
MED28Q9H204 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms