Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC022080.3-201ENST00000544433 482 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 HMGB3P26-201ENST00000560051 582 ntBASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CNTNAP4Q9C0A0 AL035425.3-201ENST00000564206 4996 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 AL359854.1-201ENST00000614203 1594 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 AC011266.1-201ENST00000624119 3569 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 RNA5SP52-201ENST00000362448 134 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 RNY1P16-201ENST00000363063 111 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 MT-TW-201ENST00000387382 68 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 AL158071.1-201ENST00000430315 461 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 snoU13.3-201ENST00000459441 104 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 AL049873.1-201ENST00000480540 376 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 AC105758.1-201ENST00000506038 399 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 SNORD116-26-201ENST00000516006 96 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.700-201ENST00000516806 100 ntBASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.57□□□□□ -1.68
CNTNAP4Q9C0A0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-288P-201ENST00000363690 104 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.180-201ENST00000363867 113 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.376-201ENST00000365638 108 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-746P-201ENST00000384112 109 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-790P-201ENST00000384479 105 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 U3.19-201ENST00000390893 196 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-837P-201ENST00000391056 108 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 AL606753.1-201ENST00000427435 87 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 SNORA40.15-201ENST00000516884 107 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 MIR548AC-201ENST00000585049 88 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 AC008962.1-201ENST00000605729 304 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 U73479.1-201ENST00000618062 168 ntBASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CNTNAP4Q9C0A0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 RNU1-108P-201ENST00000362556 161 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 SNORA70E-201ENST00000384492 135 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 SNORA48.5-201ENST00000391143 135 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 HSPE1P8-201ENST00000406997 288 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 AL353621.1-201ENST00000418219 243 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 ELOCP20-201ENST00000422460 345 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 PIGPP3-201ENST00000425307 415 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 U3.44-201ENST00000458938 192 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 AC008716.1-201ENST00000511084 513 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-914P-201ENST00000516749 109 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-255P-201ENST00000516957 105 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 SNRPGP16-201ENST00000533275 226 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 AP001005.3-201ENST00000622049 129 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 AL512643.1-201ENST00000635735 524 ntBASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CNTNAP4Q9C0A0 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.222-201ENST00000364264 102 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 SNORD113-1-201ENST00000365321 69 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-76P-201ENST00000384060 104 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 Y_RNA.477-201ENST00000384352 108 ntBASIC4.54□□□□□ -1.68
CNTNAP4Q9C0A0 RNU6-1093P-201ENST00000391194 107 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms