Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.77□□□□□ -1.65
COL25A1Q9BXS0 SRP72P2-201ENST00000344851 1979 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 RNU5A-1-201ENST00000362698 116 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 SNORA25.7-201ENST00000364375 127 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 RNA5SP130-201ENST00000364431 114 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 SNORA26.2-201ENST00000390922 122 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 SNORA48.2-201ENST00000390926 124 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AL035079.1-201ENST00000405210 287 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 RNU2-43P-201ENST00000410306 190 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AL160275.2-201ENST00000412010 394 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 RPL12P46-201ENST00000436610 195 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 Y_RNA.651-201ENST00000459380 103 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 BTF3L4P4-201ENST00000506381 449 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC010265.1-201ENST00000513509 211 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 RFPL4AP5-201ENST00000514977 504 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 Y_RNA.677-201ENST00000516401 85 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC026403.1-201ENST00000518938 295 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 IFITM8P-201ENST00000522529 394 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC084851.1-201ENST00000529105 249 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC109810.1-201ENST00000534066 224 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 TRAV8-5-201ENST00000537369 341 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC005332.5-201ENST00000591222 2919 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC024153.1-201ENST00000603103 365 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC140113.4-201ENST00000622087 222 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC048347.1-201ENST00000624621 427 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 CUL1P1-201ENST00000509510 2425 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC083843.2-201ENST00000568248 6253 ntBASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL25A1Q9BXS0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AF127577.6-201ENST00000623352 2191 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AC009541.1-201ENST00000438279 2662 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 snoU2_19.4-201ENST00000364329 80 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 RNU6-1180P-201ENST00000364935 107 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 RNU6-1286P-201ENST00000383871 107 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 HLFP1-201ENST00000402375 499 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AC087588.1-201ENST00000462203 316 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AF186996.7-201ENST00000492781 209 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AC018442.3-201ENST00000523025 183 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AC021269.2-201ENST00000532318 330 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 NACAP3-201ENST00000552100 481 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AC008555.8-201ENST00000623602 2168 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 AC010266.2-201ENST00000564741 3255 ntBASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.75□□□□□ -1.65
COL25A1Q9BXS0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 AL355834.1-201ENST00000556602 3965 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 U8.6-201ENST00000364939 135 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 RNU6-541P-201ENST00000384709 110 ntBASIC4.74□□□□□ -1.65
COL25A1Q9BXS0 MIR10A-201ENST00000385043 110 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms