Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM47Q96LD4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM47Q96LD4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-37P-201ENST00000362692 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-11P-201ENST00000364234 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-7-201ENST00000364784 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-8-201ENST00000365467 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-25P-201ENST00000383873 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-1-201ENST00000383898 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-32P-201ENST00000383948 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-4P-201ENST00000384205 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-5P-201ENST00000384238 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-17P-201ENST00000384245 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-13P-201ENST00000384248 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-3P-201ENST00000384314 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-18P-201ENST00000384527 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-12P-201ENST00000384604 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-2-201ENST00000384627 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-29P-201ENST00000384637 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-41P-201ENST00000384741 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-9-201ENST00000384776 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-817P-201ENST00000391083 104 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 AL590762.2-201ENST00000395798 571 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 SNORD12B-201ENST00000410433 91 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 Z82210.1-201ENST00000440037 231 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RANP8-201ENST00000444720 713 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU7-197P-201ENST00000458836 62 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM47Q96LD4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RNU6-6P-201ENST00000606623 107 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 AC005046.1-201ENST00000608515 625 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM47Q96LD4 AL136164.3-201ENST00000624429 3978 ntBASIC5.28□□□□□ -1.56
TRIM47Q96LD4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM47Q96LD4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM47Q96LD4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RNU6-1175P-201ENST00000365200 107 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 U3.29-201ENST00000391296 212 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 AL096701.2-201ENST00000416920 238 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM47Q96LD4 USP9YP7-201ENST00000436723 430 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RPS15AP7-201ENST00000439294 405 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RPL23AP93-201ENST00000440847 484 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 AC073587.1-201ENST00000447093 876 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 USP9YP32-201ENST00000452432 430 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 SCARNA10-201ENST00000459255 330 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RN7SL542P-201ENST00000467147 294 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RPL26P26-201ENST00000480251 434 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 SNORA40.9-201ENST00000515895 93 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RNU1-86P-201ENST00000516108 154 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RNU1-107P-201ENST00000516617 154 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RN7SKP272-201ENST00000516988 232 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 RNU6-537P-201ENST00000517277 103 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM47Q96LD4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM47Q96LD4 AC025588.3-201ENST00000604182 274 ntBASIC5.27□□□□□ -1.57
TRIM47Q96LD4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM47Q96LD4 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM47Q96LD4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 SPRR2C-201ENST00000290702 219 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 Y_RNA.123-201ENST00000363338 102 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RNU6-626P-201ENST00000363354 107 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 SNORA70.4-201ENST00000365509 134 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RNU6-1179P-201ENST00000384667 107 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RNU6-376P-201ENST00000384731 106 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 MIR554-201ENST00000384874 96 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RNU6-460P-201ENST00000391158 108 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 PPIAP31-201ENST00000405422 495 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RNA5SP44-201ENST00000410446 133 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 AC063979.1-201ENST00000415539 377 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RPS26P2-201ENST00000440331 348 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RPL21P6-201ENST00000479171 504 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RPS29P24-201ENST00000486345 171 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RNU6-27P-201ENST00000516146 107 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 Y_RNA.677-201ENST00000516401 85 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 RNU6-914P-201ENST00000516749 109 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 AC022968.1-201ENST00000567372 442 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM47Q96LD4 MTND5P35-201ENST00000557537 1720 ntBASIC5.26□□□□□ -1.57
TRIM47Q96LD4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TRIM47Q96LD4 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms