Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR548H3-201ENST00000408771 118 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 MIR1183-201ENST00000408856 89 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 AC073850.1-201ENST00000449243 255 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 SSXP4-201ENST00000451349 245 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 snoU13.28-201ENST00000459235 104 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 RPS26P28-201ENST00000470806 348 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 BX284632.1-201ENST00000478218 541 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 RPS4XP22-201ENST00000480755 780 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 IGLV2-34-201ENST00000490007 283 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 BTF3L4P4-201ENST00000506381 449 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 AC091868.1-201ENST00000508746 304 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.91□□□□□ -1.62
CALR3Q96L12 SNORA31.6-201ENST00000516241 130 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 RNA5SP309-201ENST00000516670 106 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 ACA59.2-201ENST00000517061 156 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 AC100770.1-201ENST00000532310 322 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CALR3Q96L12 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.91□□□□□ -1.62
CALR3Q96L12 HMGN2P15-201ENST00000585707 270 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 MIR7154-201ENST00000620673 73 ntBASIC4.91□□□□□ -1.62
CALR3Q96L12 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CALR3Q96L12 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CALR3Q96L12 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CALR3Q96L12 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CALR3Q96L12 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.91□□□□□ -1.62
CALR3Q96L12 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CALR3Q96L12 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CALR3Q96L12 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CALR3Q96L12 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.9□□□□□ -1.62
CALR3Q96L12 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.9□□□□□ -1.62
CALR3Q96L12 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.9□□□□□ -1.62
CALR3Q96L12 snoU2_19.2-201ENST00000363024 80 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 U8.4-201ENST00000363626 134 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 RNU6-879P-201ENST00000364328 108 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CALR3Q96L12 RNA5SP390-201ENST00000410191 113 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 AC078809.1-201ENST00000427601 140 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 RPS15AP7-201ENST00000439294 405 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 RPL12P3-201ENST00000440080 396 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 AC112498.1-201ENST00000444401 332 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.9□□□□□ -1.63
CALR3Q96L12 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CALR3Q96L12 RPSAP50-201ENST00000481955 852 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 AP001025.1-201ENST00000486139 332 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 HMGB1P35-201ENST00000503360 598 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 AC091905.2-201ENST00000623143 306 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CALR3Q96L12 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
CALR3Q96L12 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.9□□□□□ -1.63
CALR3Q96L12 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.9□□□□□ -1.63
CALR3Q96L12 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CALR3Q96L12 AF117829.1-206ENST00000621883 3802 ntBASIC4.9□□□□□ -1.63
CALR3Q96L12 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CALR3Q96L12 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CALR3Q96L12 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.89□□□□□ -1.63
CALR3Q96L12 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CALR3Q96L12 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CALR3Q96L12 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CALR3Q96L12 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CALR3Q96L12 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CALR3Q96L12 RNU6-487P-201ENST00000365430 104 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 MIR765-201ENST00000390226 114 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 RNU1-82P-201ENST00000390851 165 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 MRPL35P1-201ENST00000404272 572 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 AC004552.1-201ENST00000419089 348 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 AC093162.1-201ENST00000419682 124 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 AC004383.1-201ENST00000438135 289 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 RPL12P11-201ENST00000439970 501 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.89□□□□□ -1.63
CALR3Q96L12 RPS26P3-201ENST00000470205 348 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 AC090543.2-201ENST00000483963 348 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 AC004057.1-201ENST00000485827 348 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.89□□□□□ -1.63
CALR3Q96L12 AC008033.2-201ENST00000542626 177 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 AC023824.2-201ENST00000566185 400 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.89□□□□□ -1.63
CALR3Q96L12 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CALR3Q96L12 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.89□□□□□ -1.63
CALR3Q96L12 ZNF137P-201ENST00000456718 1920 ntBASIC4.89□□□□□ -1.63
CALR3Q96L12 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CALR3Q96L12 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.89□□□□□ -1.63
CALR3Q96L12 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.88□□□□□ -1.63
CALR3Q96L12 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CALR3Q96L12 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CALR3Q96L12 AL391987.6-201ENST00000305671 199 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 AC092268.1-201ENST00000342691 405 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 SNORD81.1-201ENST00000363064 77 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 RNU6-137P-201ENST00000363680 108 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 Y_RNA.237-201ENST00000364439 102 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 Y_RNA.319-201ENST00000365138 92 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 Y_RNA.416-201ENST00000384014 113 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 RNA5SP213-201ENST00000391031 106 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 TMSB10P2-201ENST00000416049 131 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 AC011753.3-201ENST00000443436 406 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.88□□□□□ -1.63
CALR3Q96L12 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.88□□□□□ -1.63
CALR3Q96L12 FTH1P9-201ENST00000513251 355 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 AC015795.1-201ENST00000513669 327 ntBASIC4.88□□□□□ -1.63
CALR3Q96L12 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
CALR3Q96L12 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms