Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 BTF3L4P2-201ENST00000392798 346 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 MTND5P8-201ENST00000449817 1083 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 snoU13.7-201ENST00000459220 104 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AL049830.1-201ENST00000468034 425 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.21□□□□□ -2.38
SPG11Q96JI7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SPG11Q96JI7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.21□□□□□ -2.38
SPG11Q96JI7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.21□□□□□ -2.38
SPG11Q96JI7 AC012213.4-201ENST00000606457 354 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AC027335.2-201ENST00000624030 375 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AP003399.1-201ENST00000637534 361 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AC016716.1-201ENST00000265882 708 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 SNORD114-31-201ENST00000363219 75 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 RNU6-1293P-201ENST00000384077 107 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 MTND4P11-201ENST00000417020 1058 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AC099677.1-201ENST00000420575 175 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AL096803.2-201ENST00000450032 677 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 HMGB1P14-201ENST00000557424 591 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 MED28P6-201ENST00000558776 231 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 MIR4768-201ENST00000585270 74 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 OR1M4P-201ENST00000589199 287 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AC243960.4-201ENST00000600532 288 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 AC123767.1-202ENST00000620407 817 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 RNU6-156P-201ENST00000621869 107 ntBASIC0.21□□□□□ -2.38
SPG11Q96JI7 CR848007.1-201ENST00000442354 1699 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
SPG11Q96JI7 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.2□□□□□ -2.38
SPG11Q96JI7 RNY4P6-201ENST00000363667 96 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 RNU6-654P-201ENST00000364373 107 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 RNU6-26P-201ENST00000383985 107 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 AL356421.1-201ENST00000403255 413 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 RNU6-1328P-201ENST00000410938 106 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.2□□□□□ -2.38
SPG11Q96JI7 MTCYBP24-201ENST00000420387 1106 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.2□□□□□ -2.38
SPG11Q96JI7 GTF2IP13-201ENST00000438487 386 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 SNORA76.2-201ENST00000517095 137 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 CENPUP1-201ENST00000526649 1202 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 AL355297.3-201ENST00000604082 446 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 AL162730.1-201ENST00000605734 292 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 AC100812.1-201ENST00000607622 580 ntBASIC0.2□□□□□ -2.38
SPG11Q96JI7 SNORA36.1-201ENST00000363424 132 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 MIR618-201ENST00000385287 98 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
SPG11Q96JI7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.19□□□□□ -2.38
SPG11Q96JI7 CR769776.1-201ENST00000441254 787 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 RPS27AP8-201ENST00000452665 445 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 TRGVB-201ENST00000453257 471 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 TRBV8-1-201ENST00000481590 279 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 COX6CP6-201ENST00000490840 228 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 RPL22P13-201ENST00000493291 347 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 AL133373.1-201ENST00000497098 94 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.19□□□□□ -2.38
SPG11Q96JI7 AF213884.2-201ENST00000510417 903 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.19□□□□□ -2.38
SPG11Q96JI7 SCARNA11.3-201ENST00000517276 130 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 AL021997.1-201ENST00000605757 193 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 AL355472.4-201ENST00000610233 626 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 FAM157B-203ENST00000639350 358 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
SPG11Q96JI7 RNA5SP361-201ENST00000362686 118 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 RNU1-124P-201ENST00000363861 145 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.19□□□□□ -2.38
SPG11Q96JI7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.19□□□□□ -2.38
SPG11Q96JI7 AC141557.1-201ENST00000540982 400 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.19□□□□□ -2.38
SPG11Q96JI7 PCNAP1-202ENST00000595299 752 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 AC110792.4-201ENST00000609843 298 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 AC099654.5-201ENST00000636479 350 ntBASIC0.19□□□□□ -2.38
SPG11Q96JI7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SPG11Q96JI7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SPG11Q96JI7 MIR26B-201ENST00000362251 77 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 RNU6-1155P-201ENST00000363554 107 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 SNORD18A-201ENST00000363753 72 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 RNU6-338P-201ENST00000383888 105 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 MIR320B1-201ENST00000390209 79 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 U3.20-201ENST00000390909 217 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 EIF4EP4-201ENST00000424916 578 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.18□□□□□ -2.38
SPG11Q96JI7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.18□□□□□ -2.38
SPG11Q96JI7 AC093027.1-201ENST00000546698 429 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.18□□□□□ -2.38
SPG11Q96JI7 AL359212.1-201ENST00000556608 614 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 FRG1HP-204ENST00000617940 757 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.18□□□□□ -2.38
SPG11Q96JI7 RNU6-1083P-201ENST00000384022 107 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 RPS27P16-201ENST00000425758 201 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 AC093106.2-201ENST00000428212 385 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
SPG11Q96JI7 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.18□□□□□ -2.38
SPG11Q96JI7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.18□□□□□ -2.38
SPG11Q96JI7 TPMTP4-201ENST00000450749 678 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.18□□□□□ -2.38
SPG11Q96JI7 RNU6-420P-201ENST00000458780 107 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 RNU7-27P-201ENST00000459281 62 ntBASIC0.18□□□□□ -2.38
SPG11Q96JI7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.18□□□□□ -2.38
SPG11Q96JI7 AL590705.4-201ENST00000532209 134 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms