Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM41Q8WV44 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
TRIM41Q8WV44 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC7.3□□□□□ -1.24
TRIM41Q8WV44 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 RNA5SP175-201ENST00000364275 119 ntBASIC7.29□□□□□ -1.24
TRIM41Q8WV44 SNORA5A-201ENST00000384111 134 ntBASIC7.29□□□□□ -1.24
TRIM41Q8WV44 RNU6-651P-201ENST00000411040 105 ntBASIC7.29□□□□□ -1.24
TRIM41Q8WV44 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 MAPK10-286ENST00000641208 8747 ntBASIC7.29□□□□□ -1.24
TRIM41Q8WV44 GHR-202ENST00000357703 4316 ntTSL 5 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 GHR-213ENST00000622294 4312 ntTSL 5 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC7.29□□□□□ -1.24
TRIM41Q8WV44 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 RNU6-923P-201ENST00000364753 107 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 RNU6-384P-201ENST00000364900 104 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 RNU1-44P-201ENST00000384453 163 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 RNU6-735P-201ENST00000410612 107 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 RNU2-61P-201ENST00000411069 191 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 AL451050.1-201ENST00000450126 415 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 RNA5SP519-201ENST00000516480 119 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 RNU2-31P-201ENST00000516954 155 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 IGKV2D-19-201ENST00000523346 262 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 AL365361.1-201ENST00000566942 3481 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 AC016588.2-201ENST00000632484 3021 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 AC020633.1-201ENST00000468439 2247 ntBASIC7.28□□□□□ -1.24
TRIM41Q8WV44 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
TRIM41Q8WV44 SUPT16HP1-201ENST00000537175 3133 ntBASIC7.27□□□□□ -1.24
TRIM41Q8WV44 AC008725.1-201ENST00000605123 2263 ntBASIC7.27□□□□□ -1.24
TRIM41Q8WV44 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC7.27□□□□□ -1.24
TRIM41Q8WV44 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 RNU1-14P-201ENST00000362759 152 ntBASIC7.27□□□□□ -1.25
TRIM41Q8WV44 RNU6-882P-201ENST00000391025 103 ntBASIC7.27□□□□□ -1.25
TRIM41Q8WV44 RPS26P47-201ENST00000427219 348 ntBASIC7.27□□□□□ -1.25
TRIM41Q8WV44 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 RN7SL293P-201ENST00000481765 281 ntBASIC7.27□□□□□ -1.25
TRIM41Q8WV44 MRPS18CP4-201ENST00000535821 231 ntBASIC7.27□□□□□ -1.25
TRIM41Q8WV44 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 AC008121.1-201ENST00000603244 268 ntBASIC7.27□□□□□ -1.25
TRIM41Q8WV44 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC7.27□□□□□ -1.25
TRIM41Q8WV44 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC7.26□□□□□ -1.25
TRIM41Q8WV44 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM41Q8WV44 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM41Q8WV44 AC126323.6-202ENST00000568092 3511 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 RNU6-417P-201ENST00000384712 107 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 RNU4-30P-201ENST00000410245 143 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 AL117339.3-201ENST00000418733 162 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC7.26□□□□□ -1.25
TRIM41Q8WV44 RPL23AP65-201ENST00000475608 468 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 AC108022.1-201ENST00000493466 478 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 RNU6-927P-201ENST00000516199 100 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 RNU6-62P-201ENST00000516526 102 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM41Q8WV44 H3F3AP1-201ENST00000559984 334 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC7.26□□□□□ -1.25
TRIM41Q8WV44 AC090617.3-201ENST00000573670 475 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 AL161629.2-201ENST00000615347 275 ntBASIC7.26□□□□□ -1.25
TRIM41Q8WV44 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM41Q8WV44 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC7.26□□□□□ -1.25
TRIM41Q8WV44 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
TRIM41Q8WV44 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC7.25□□□□□ -1.25
TRIM41Q8WV44 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
TRIM41Q8WV44 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC7.25□□□□□ -1.25
TRIM41Q8WV44 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC7.25□□□□□ -1.25
TRIM41Q8WV44 SNORA25.1-201ENST00000362326 128 ntBASIC7.25□□□□□ -1.25
TRIM41Q8WV44 Y_RNA.240-201ENST00000364469 95 ntBASIC7.25□□□□□ -1.25
TRIM41Q8WV44 RNU6-514P-201ENST00000384208 107 ntBASIC7.25□□□□□ -1.25
TRIM41Q8WV44 Y_RNA.504-201ENST00000384481 104 ntBASIC7.25□□□□□ -1.25
TRIM41Q8WV44 RNU6-1154P-201ENST00000391001 104 ntBASIC7.25□□□□□ -1.25
TRIM41Q8WV44 MIR1911-201ENST00000410783 80 ntBASIC7.25□□□□□ -1.25
TRIM41Q8WV44 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms