Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.61□□□□□ -1.67
NPAS4Q8IUM7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPAS4Q8IUM7 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AC110491.1-201ENST00000562191 2010 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 SNORA62.3-201ENST00000365110 153 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 RNU6-1280P-201ENST00000365211 107 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 MIR625-201ENST00000385047 85 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 RNU6-700P-201ENST00000391043 107 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 RNU6-1156P-201ENST00000410365 100 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AC007098.1-201ENST00000420122 367 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 RPS3AP46-201ENST00000448352 682 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 OR2AQ1P-201ENST00000451972 200 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 RPL23AP14-201ENST00000468281 468 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AC034236.1-201ENST00000469891 373 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 FO393415.2-201ENST00000480085 343 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 HMGB1P35-201ENST00000503360 598 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 SNORA40.14-201ENST00000516543 86 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 RNU1-45P-201ENST00000517191 141 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AL137100.2-201ENST00000555786 315 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 RPL23AP97-201ENST00000568955 471 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 RN7SL703P-201ENST00000578485 302 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 RPL7P50-201ENST00000600588 727 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AC010201.1-201ENST00000605051 540 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 MIR8069-1-201ENST00000616627 86 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 MIR8069-2-201ENST00000621412 86 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 AC010733.2-201ENST00000589496 5702 ntBASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.6□□□□□ -1.67
NPAS4Q8IUM7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 OR56A5-201ENST00000340110 738 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 CYCSP19-201ENST00000411715 316 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 RPL23AP46-201ENST00000438548 490 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 RNA5SP246-201ENST00000458909 119 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 RPL39P38-201ENST00000467018 153 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 RN7SL604P-201ENST00000492589 296 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AC010265.1-201ENST00000513509 211 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 RNU6-138P-201ENST00000515952 107 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 RRN3P3-201ENST00000549207 578 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AL391261.3-201ENST00000557194 520 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AC008669.1-201ENST00000565823 2178 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AL451007.1-201ENST00000595491 289 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 RAC1P9-201ENST00000604990 392 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AC098479.1-201ENST00000609225 154 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AC068831.7-201ENST00000616954 363 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AC024581.2-201ENST00000619986 252 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AC006111.3-201ENST00000622137 383 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 MIR3199-2-201ENST00000636243 86 ntBASIC4.59□□□□□ -1.67
NPAS4Q8IUM7 AL136164.4-201ENST00000625013 2135 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 MTND5P6-201ENST00000422338 1798 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 AC007496.3-201ENST00000624987 3443 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 RNU6-858P-201ENST00000362436 107 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 RNU4-42P-201ENST00000364738 142 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 Y_RNA.562-201ENST00000384695 113 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 MTCO3P8-201ENST00000453691 755 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 HMGN2P7-201ENST00000456186 273 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 AC146944.2-203ENST00000502493 354 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 AC139495.1-202ENST00000513164 354 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 SNORA25.11-201ENST00000515935 105 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 RNU6-397P-201ENST00000516226 104 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 IFITM8P-201ENST00000522529 394 ntBASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPAS4Q8IUM7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms