Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 U8.19-201ENST00000459095 133 ntBASIC5□□□□□ -1.61
PTCRAQ6ISU1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5□□□□□ -1.61
PTCRAQ6ISU1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5□□□□□ -1.61
PTCRAQ6ISU1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PTCRAQ6ISU1 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCRAQ6ISU1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PTCRAQ6ISU1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PTCRAQ6ISU1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 SNORA62.3-201ENST00000365110 153 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 Y_RNA.329-201ENST00000365209 107 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 Z98749.2-208ENST00000381646 500 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 RNU6-245P-201ENST00000384020 107 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 RNU6-793P-201ENST00000384233 104 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 RNU6-429P-201ENST00000384582 108 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 SNORA8.3-201ENST00000384679 139 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 RNU6-476P-201ENST00000384726 107 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 SNORD37.2-201ENST00000391075 66 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 COX6CP13-201ENST00000428703 226 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 AC091868.1-201ENST00000508746 304 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 SNORA31.20-201ENST00000517111 133 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 AC136628.3-201ENST00000521868 290 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 AC109810.1-201ENST00000534066 224 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 MIR3646-201ENST00000578301 84 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 RNA5SP108-201ENST00000605921 117 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 MIR3674-201ENST00000636576 68 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 MARK2P15-201ENST00000432204 2186 ntBASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
PTCRAQ6ISU1 AC008568.2-201ENST00000623862 2313 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 SNORD56.1-201ENST00000362913 68 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 AL356387.2-201ENST00000422272 243 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 AL358232.1-201ENST00000448030 501 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 AC000111.2-201ENST00000448200 210 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 AL451050.1-201ENST00000450126 415 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 RN7SL441P-201ENST00000492388 296 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 RNU1-6P-201ENST00000516290 144 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 RNA5SP143-201ENST00000516936 115 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 Y_RNA.709-201ENST00000516952 92 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 AC090877.1-201ENST00000561418 344 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 MIR3613-201ENST00000579844 87 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 LARP7P3-201ENST00000579888 337 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 MIR4444-1-201ENST00000581696 74 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 MIR4444-2-201ENST00000584390 74 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 AC013791.1-201ENST00000616619 62 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 RNA5SP439-201ENST00000617595 124 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 CUL1P1-201ENST00000509510 2425 ntBASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
PTCRAQ6ISU1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 GVINP1-202ENST00000531871 7271 ntBASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 SNORA71.2-201ENST00000364941 134 ntBASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 Y_RNA.309-201ENST00000365046 111 ntBASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 RNU6-1144P-201ENST00000384247 104 ntBASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.97□□□□□ -1.61
PTCRAQ6ISU1 RN7SKP267-201ENST00000410381 285 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms