Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL355812.1-201ENST00000603215 216 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC004852.3-201ENST00000614131 326 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 RMST_4.1-201ENST00000616886 107 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 AC140479.6-201ENST00000633535 357 ntBASIC4.51□□□□□ -1.69
RNF43Q68DV7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNF43Q68DV7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RNF43Q68DV7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF43Q68DV7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF43Q68DV7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNF43Q68DV7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF43Q68DV7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RNF43Q68DV7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 MIR331-201ENST00000362302 94 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-37P-201ENST00000362692 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-11P-201ENST00000364234 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU1-132P-201ENST00000364300 164 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-923P-201ENST00000364753 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-7-201ENST00000364784 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-8-201ENST00000365467 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-827P-201ENST00000365553 106 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-25P-201ENST00000383873 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-1-201ENST00000383898 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-36P-201ENST00000384172 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-4P-201ENST00000384205 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-5P-201ENST00000384238 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-3P-201ENST00000384314 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-16P-201ENST00000384385 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-15P-201ENST00000384534 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-2-201ENST00000384627 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-29P-201ENST00000384637 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-9-201ENST00000384776 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-1168P-201ENST00000390831 104 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 Y_RNA.590-201ENST00000410140 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 RPL23AP36-201ENST00000413895 458 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 BX276092.4-201ENST00000452056 248 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF43Q68DV7 AC022493.1-201ENST00000492984 337 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 MIR892C-201ENST00000516410 77 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 Y_RNA.679-201ENST00000516416 91 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 RNU6-6P-201ENST00000606623 107 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 AL365222.1-201ENST00000614661 98 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 AC112200.1-201ENST00000625015 234 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RNF43Q68DV7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 PRO1804-201ENST00000623780 2050 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 AC027290.2-201ENST00000623210 18662 ntBASIC4.5□□□□□ -1.69
RNF43Q68DV7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RNF43Q68DV7 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF43Q68DV7 RBBP8P1-201ENST00000449447 1844 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF43Q68DV7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF43Q68DV7 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RNF43Q68DV7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF43Q68DV7 U3.6-201ENST00000363622 211 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 RNA5SP513-201ENST00000364648 118 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 Y_RNA.418-201ENST00000384029 102 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 SNORD78.2-201ENST00000391076 69 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 RNU2-61P-201ENST00000411069 191 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 SSXP9-201ENST00000417503 292 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 RPL23AP52-201ENST00000439311 478 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 HIGD1AP2-201ENST00000446367 280 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 RPL7L1P1-201ENST00000448259 785 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 AP001324.2-201ENST00000461163 319 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 RPS15AP34-201ENST00000487776 387 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF43Q68DV7 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF43Q68DV7 RNU6-1219P-201ENST00000516143 112 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 RN7SKP277-201ENST00000516895 283 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 RNU2-31P-201ENST00000516954 155 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 MIR2355-201ENST00000517199 87 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 AC104581.2-201ENST00000572227 430 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 MIR3944-201ENST00000581277 108 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 AC108706.1-201ENST00000611053 297 ntBASIC4.49□□□□□ -1.69
RNF43Q68DV7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF43Q68DV7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RNF43Q68DV7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF43Q68DV7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
RNF43Q68DV7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF43Q68DV7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF43Q68DV7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF43Q68DV7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms