Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.45□□□□□ -1.54
RC3H1Q5TC82 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 NOL8P1-201ENST00000508336 3529 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 MAPK10-349ENST00000641767 3661 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 RNU6-834P-201ENST00000362367 110 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 Y_RNA.33-201ENST00000362591 102 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 RNA5SP307-201ENST00000362863 116 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 RNU6-1155P-201ENST00000363554 107 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 RNU6-879P-201ENST00000364328 108 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 CTSL3P-202ENST00000412179 788 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AL592148.1-201ENST00000413568 445 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 SSXP9-201ENST00000417503 292 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AL133547.1-201ENST00000448546 220 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 BX276092.4-201ENST00000452056 248 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AC022795.1-201ENST00000473808 480 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AC008739.3-201ENST00000603262 127 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AC005046.1-201ENST00000608515 625 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AC131238.1-201ENST00000617135 328 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AC091905.2-201ENST00000623143 306 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 AC012442.3-202ENST00000636742 206 ntBASIC5.44□□□□□ -1.54
RC3H1Q5TC82 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.44□□□□□ -1.54
RC3H1Q5TC82 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 UBE2L2-201ENST00000254302 429 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 Y_RNA.217-201ENST00000364214 105 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 RNU6-843P-201ENST00000384454 104 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 MIR449B-201ENST00000384995 97 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 MIR921-201ENST00000401133 56 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 RNU2-43P-201ENST00000410306 190 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 SNORD12B-201ENST00000410433 91 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AL390729.2-201ENST00000416137 156 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 MTND4LP9-201ENST00000427694 174 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 SEPT7P4-201ENST00000437076 306 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 MRPS10P1-201ENST00000448483 130 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 Y_RNA.641-201ENST00000459414 105 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AC117440.1-201ENST00000474107 571 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 RNU4-57P-201ENST00000515980 135 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 RNU6-1095P-201ENST00000516148 108 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 Y_RNA.686-201ENST00000516548 134 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 HSPE1P5-201ENST00000561489 272 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AL139395.1-201ENST00000603662 160 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AL161629.2-201ENST00000615347 275 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 BMS1P21-201ENST00000634565 365 ntBASIC5.43□□□□□ -1.54
RC3H1Q5TC82 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RC3H1Q5TC82 AP001642.1-201ENST00000624727 2117 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AC073136.1-201ENST00000449426 2884 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RC3H1Q5TC82 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RC3H1Q5TC82 NCAPGP1-201ENST00000505112 1814 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AC110774.1-201ENST00000623567 2018 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AL391516.1-201ENST00000554380 2449 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 Y_RNA.7-201ENST00000362352 102 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 RNU6-17P-201ENST00000384245 107 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 RNU6-18P-201ENST00000384527 107 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 Y_RNA.570-201ENST00000384750 101 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 MIR200C-201ENST00000384980 68 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AP000907.1-201ENST00000428428 510 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AL500522.2-201ENST00000448562 343 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 HMGB3P3-201ENST00000510526 400 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AC005476.1-201ENST00000554427 397 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AC010928.2-201ENST00000588017 287 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AC005520.5-201ENST00000613926 164 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 CR392039.5-201ENST00000623201 510 ntBASIC5.42□□□□□ -1.54
RC3H1Q5TC82 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.42□□□□□ -1.54
RC3H1Q5TC82 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RC3H1Q5TC82 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.42□□□□□ -1.54
RC3H1Q5TC82 AC107068.1-201ENST00000563286 4218 ntBASIC5.41□□□□□ -1.54
RC3H1Q5TC82 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RC3H1Q5TC82 MIR412-201ENST00000362142 91 ntBASIC5.41□□□□□ -1.54
RC3H1Q5TC82 RNU6-626P-201ENST00000363354 107 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms