Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNFT1Q5M7Z0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
RNFT1Q5M7Z0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
RNFT1Q5M7Z0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNFT1Q5M7Z0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RNFT1Q5M7Z0 AC010329.5-201ENST00000623497 2174 ntBASIC4.54□□□□□ -1.68
RNFT1Q5M7Z0 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RNFT1Q5M7Z0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RNFT1Q5M7Z0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
RNFT1Q5M7Z0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 SCARNA15-201ENST00000607520 4325 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 RNU6-527P-201ENST00000363425 104 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 RNU6-728P-201ENST00000365375 104 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 RNU6-969P-201ENST00000383900 105 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 RNA5SP241-201ENST00000391326 114 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AL592291.1-201ENST00000403830 352 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AL590139.1-201ENST00000416267 400 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 RPL23AP95-201ENST00000426806 265 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 RPS29P9-201ENST00000440360 171 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC011753.3-201ENST00000443436 406 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 RPL30P12-201ENST00000474666 353 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 RNU6-436P-201ENST00000516171 114 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC136624.4-201ENST00000573044 370 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 MIR5571-201ENST00000577998 113 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 MIR4270-201ENST00000581799 70 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC112198.2-201ENST00000426589 6996 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC068647.1-201ENST00000489539 2265 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 AC018555.1-201ENST00000567548 1980 ntBASIC4.53□□□□□ -1.68
RNFT1Q5M7Z0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AC104260.2-201ENST00000623551 3497 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 MFSD8-216ENST00000641147 4009 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-1249P-201ENST00000363237 111 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 U3.9-201ENST00000363823 204 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-597P-201ENST00000365620 102 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 SNORA70.10-201ENST00000384515 134 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-19P-201ENST00000384718 107 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 SNORD72-201ENST00000390994 80 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RNA5SP113-201ENST00000410486 84 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 ELOCP21-201ENST00000412558 336 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 FAR2P2-201ENST00000413041 594 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AC119751.6-201ENST00000416712 186 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RPL39P29-201ENST00000447779 157 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 HMGB3P8-201ENST00000449709 577 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 snoU109.2-201ENST00000459316 135 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RNU6-1061P-201ENST00000516530 99 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RNA5SP392-201ENST00000516905 112 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AC027369.5-201ENST00000533838 755 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RN7SL290P-201ENST00000578661 300 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 MIR3667-201ENST00000581025 74 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RN7SL52P-201ENST00000584271 284 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AC006380.1-201ENST00000603598 186 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AC008745.1-201ENST00000604064 271 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RN7SL722P-201ENST00000617780 284 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 RN7SL565P-201ENST00000618246 284 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AL596275.2-206ENST00000641957 626 ntBASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
RNFT1Q5M7Z0 AP001029.2-203ENST00000589795 4910 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AL450345.1-202ENST00000605741 3881 ntBASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.51□□□□□ -1.69
RNFT1Q5M7Z0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms