Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AP001486.3-201ENST00000615334 372 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AC009233.1-201ENST00000616477 371 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 AC091953.5-201ENST00000622919 233 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 MIR3529-201ENST00000637713 78 ntBASIC2.51□□□□□ -2.01
SCN1BQ07699 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SCN1BQ07699 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SCN1BQ07699 AC006020.1-201ENST00000420179 1854 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 OR56A5-201ENST00000340110 738 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 MIR6073-201ENST00000352083 89 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 RNU1-52P-201ENST00000384190 164 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 MIR23B-201ENST00000384832 97 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 AC007064.1-201ENST00000412238 351 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 UBE2V1P10-201ENST00000414685 269 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.5□□□□□ -2.01
SCN1BQ07699 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN1BQ07699 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SCN1BQ07699 BX510359.1-201ENST00000456973 237 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 AC008526.1-201ENST00000509149 338 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN1BQ07699 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN1BQ07699 SNORA31.15-201ENST00000516771 132 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 AC090136.1-201ENST00000520009 240 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.5□□□□□ -2.01
SCN1BQ07699 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN1BQ07699 SUB1P2-201ENST00000556401 297 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.5□□□□□ -2.01
SCN1BQ07699 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.5□□□□□ -2.01
SCN1BQ07699 SRGNP1-201ENST00000603392 451 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 AC096772.1-201ENST00000609146 564 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.5□□□□□ -2.01
SCN1BQ07699 AC026585.1-201ENST00000619582 524 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 MIR6075-201ENST00000620782 95 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 CR381653.2-201ENST00000624041 768 ntBASIC2.5□□□□□ -2.01
SCN1BQ07699 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
SCN1BQ07699 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SCN1BQ07699 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SCN1BQ07699 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN1BQ07699 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN1BQ07699 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN1BQ07699 OR4G2P-201ENST00000328113 903 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 RNU4-48P-201ENST00000365559 182 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 RNU6-843P-201ENST00000384454 104 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 MIR34B-201ENST00000385076 84 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN1BQ07699 RNU2-9P-201ENST00000410194 145 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN1BQ07699 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN1BQ07699 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN1BQ07699 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN1BQ07699 EIF4EP4-201ENST00000424916 578 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN1BQ07699 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN1BQ07699 AC022364.2-201ENST00000457963 554 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 RN7SL807P-201ENST00000470923 297 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 CKS1BP2-201ENST00000497342 240 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN1BQ07699 AF213884.2-201ENST00000510417 903 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 AC008885.1-201ENST00000514930 301 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 SCGB1D5P-201ENST00000515134 247 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 RNU1-104P-201ENST00000517280 175 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN1BQ07699 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.49□□□□□ -2.01
SCN1BQ07699 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN1BQ07699 AP000873.5-201ENST00000533906 236 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 AC136619.2-201ENST00000563361 631 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 AL391840.1-201ENST00000571144 367 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.49□□□□□ -2.01
SCN1BQ07699 AC119751.7-201ENST00000600494 245 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 AL161756.2-201ENST00000604597 246 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 SNORD14A-201ENST00000606526 91 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.49□□□□□ -2.01
SCN1BQ07699 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 RMST_4.1-201ENST00000616886 107 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 AC009161.2-201ENST00000624626 138 ntBASIC2.49□□□□□ -2.01
SCN1BQ07699 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN1BQ07699 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.49□□□□□ -2.01
SCN1BQ07699 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCN1BQ07699 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN1BQ07699 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SCN1BQ07699 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
SCN1BQ07699 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SCN1BQ07699 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.48□□□□□ -2.01
SCN1BQ07699 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SCN1BQ07699 SNORA63.1-201ENST00000362493 131 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 SNORD114-19-201ENST00000363072 75 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 RNU6-715P-201ENST00000365204 103 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 SNORA75-201ENST00000384158 137 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 RNU6-45P-201ENST00000384471 107 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 Y_RNA.553-201ENST00000384670 102 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SCN1BQ07699 RNA5SP181-201ENST00000410246 98 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 RNU2-63P-201ENST00000410792 194 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.48□□□□□ -2.01
SCN1BQ07699 SUMO1P4-201ENST00000429430 302 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 MTCO2P11-201ENST00000431069 680 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 AL365400.1-201ENST00000431854 640 ntBASIC2.48□□□□□ -2.01
SCN1BQ07699 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.48□□□□□ -2.01
SCN1BQ07699 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.48□□□□□ -2.01
SCN1BQ07699 AL596276.1-201ENST00000434465 418 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms