Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDL3P58872 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDL3P58872 RPL21P39-201ENST00000463605 483 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 RPL21P93-201ENST00000480465 489 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AC087190.1-201ENST00000484462 480 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDL3P58872 AC093591.1-201ENST00000491435 481 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 RPL21P16-201ENST00000495531 483 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDL3P58872 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDL3P58872 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDL3P58872 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDL3P58872 AC079600.2-201ENST00000550076 130 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 MIR4765-201ENST00000585007 77 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 ELOCP29-201ENST00000588193 334 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDL3P58872 RPL12P50-201ENST00000603116 116 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AL136363.2-201ENST00000604173 851 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AL670379.10-201ENST00000604330 253 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AL670379.9-201ENST00000605428 253 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AC103591.3-201ENST00000608684 209 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AC017083.3-201ENST00000609955 700 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.5□□□□□ -1.85
RHBDL3P58872 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDL3P58872 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
RHBDL3P58872 OR4G2P-201ENST00000328113 903 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 SNORD3E-201ENST00000362899 217 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 RNU6-461P-201ENST00000364195 107 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 RNU6-72P-201ENST00000384285 79 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 RNU6-434P-201ENST00000384376 107 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.49□□□□□ -1.85
RHBDL3P58872 AC016907.1-201ENST00000419483 435 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.49□□□□□ -1.85
RHBDL3P58872 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.49□□□□□ -1.85
RHBDL3P58872 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.49□□□□□ -1.85
RHBDL3P58872 AC006539.3-201ENST00000454258 129 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 AC027673.1-201ENST00000456245 405 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 RPL23AP70-201ENST00000483361 460 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 AC011005.2-201ENST00000487324 359 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.49□□□□□ -1.85
RHBDL3P58872 AC114781.4-201ENST00000513707 639 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 RNA5SP112-201ENST00000515937 99 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 SNORA64.4-201ENST00000516632 81 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 RNU6-1178P-201ENST00000516674 107 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.49□□□□□ -1.85
RHBDL3P58872 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.49□□□□□ -1.85
RHBDL3P58872 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.49□□□□□ -1.85
RHBDL3P58872 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.49□□□□□ -1.85
RHBDL3P58872 AC027807.1-201ENST00000559921 996 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 AP001596.2-201ENST00000608410 312 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 OR5AK4P-201ENST00000635912 903 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 MIR3529-201ENST00000637713 78 ntBASIC3.49□□□□□ -1.85
RHBDL3P58872 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
RHBDL3P58872 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
RHBDL3P58872 AC004972.1-201ENST00000623934 2209 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 AL109809.4-201ENST00000603520 2185 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
RHBDL3P58872 RNU6-486P-201ENST00000363116 107 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 RNU6-715P-201ENST00000365204 103 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 RNU6-996P-201ENST00000365438 107 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 AL592148.1-201ENST00000413568 445 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 MTCO3P41-201ENST00000414801 328 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 RPL32P35-201ENST00000415214 394 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.48□□□□□ -1.85
RHBDL3P58872 FABP5P14-201ENST00000437273 393 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 RPL21P2-201ENST00000440049 481 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 RN7SL442P-201ENST00000473804 320 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 RN7SKP40-201ENST00000517211 242 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.48□□□□□ -1.85
RHBDL3P58872 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.48□□□□□ -1.85
RHBDL3P58872 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.48□□□□□ -1.85
RHBDL3P58872 ATP1B3P1-201ENST00000605365 821 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 RPL23AP88-201ENST00000605759 454 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 AL158209.2-201ENST00000619266 216 ntBASIC3.48□□□□□ -1.85
RHBDL3P58872 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.48□□□□□ -1.85
RHBDL3P58872 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.48□□□□□ -1.85
RHBDL3P58872 AL161431.1-201ENST00000618966 4205 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.47□□□□□ -1.85
RHBDL3P58872 SET-203ENST00000372688 801 ntTSL 2 BASIC3.47□□□□□ -1.85
RHBDL3P58872 RNU6-393P-201ENST00000384475 107 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 RNU6-607P-201ENST00000411283 108 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 AC016831.2-201ENST00000417179 352 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.47□□□□□ -1.85
RHBDL3P58872 MTND1P1-201ENST00000445453 368 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.47□□□□□ -1.85
RHBDL3P58872 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.47□□□□□ -1.85
RHBDL3P58872 MTND2P33-201ENST00000506452 1031 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 RNU5B-3P-201ENST00000516601 115 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 RN7SKP219-201ENST00000516825 296 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.47□□□□□ -1.85
RHBDL3P58872 BTF3P12-201ENST00000519620 469 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.47□□□□□ -1.85
RHBDL3P58872 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.47□□□□□ -1.85
RHBDL3P58872 AC009163.5-201ENST00000575421 637 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 LRRC37A5P-203ENST00000580181 585 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 AC103987.3-201ENST00000582071 292 ntBASIC3.47□□□□□ -1.85
RHBDL3P58872 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RHBDL3P58872 MIR4506-201ENST00000584693 77 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms