Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL078601.1-201ENST00000444542 271 ntBASIC3.63□□□□□ -1.83
PER3P56645 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.63□□□□□ -1.83
PER3P56645 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.63□□□□□ -1.83
PER3P56645 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.63□□□□□ -1.83
PER3P56645 PTP4A1P4-201ENST00000512479 322 ntBASIC3.63□□□□□ -1.83
PER3P56645 SMURF2P1-201ENST00000514992 481 ntBASIC3.63□□□□□ -1.83
PER3P56645 RNU6-1231P-201ENST00000517185 103 ntBASIC3.63□□□□□ -1.83
PER3P56645 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PER3P56645 AC091516.1-201ENST00000549191 703 ntBASIC3.63□□□□□ -1.83
PER3P56645 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.63□□□□□ -1.83
PER3P56645 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.63□□□□□ -1.83
PER3P56645 MTCO3P13-201ENST00000577757 781 ntBASIC3.63□□□□□ -1.83
PER3P56645 AC012468.1-201ENST00000604888 430 ntBASIC3.63□□□□□ -1.83
PER3P56645 AC027309.3-201ENST00000623419 351 ntBASIC3.63□□□□□ -1.83
PER3P56645 AL732372.2-225ENST00000642124 456 ntBASIC3.63□□□□□ -1.83
PER3P56645 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PER3P56645 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PER3P56645 AL672296.1-201ENST00000427780 2158 ntBASIC3.63□□□□□ -1.83
PER3P56645 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
PER3P56645 AC090740.1-201ENST00000623193 2262 ntBASIC3.63□□□□□ -1.83
PER3P56645 MTND5P1-201ENST00000445440 1375 ntBASIC3.63□□□□□ -1.83
PER3P56645 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PER3P56645 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.63□□□□□ -1.83
PER3P56645 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
PER3P56645 Y_RNA.202-201ENST00000364083 110 ntBASIC3.62□□□□□ -1.83
PER3P56645 Z98749.2-208ENST00000381646 500 ntBASIC3.62□□□□□ -1.83
PER3P56645 HMGN2P8-201ENST00000391458 268 ntBASIC3.62□□□□□ -1.83
PER3P56645 RNU6-293P-201ENST00000411259 106 ntBASIC3.62□□□□□ -1.83
PER3P56645 AC093578.1-201ENST00000415219 368 ntBASIC3.62□□□□□ -1.83
PER3P56645 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.62□□□□□ -1.83
PER3P56645 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.62□□□□□ -1.83
PER3P56645 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.62□□□□□ -1.83
PER3P56645 MTND4P19-201ENST00000446659 478 ntBASIC3.62□□□□□ -1.83
PER3P56645 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.62□□□□□ -1.83
PER3P56645 RPL23AP45-201ENST00000476406 468 ntBASIC3.62□□□□□ -1.83
PER3P56645 RPS4XP13-201ENST00000483219 789 ntBASIC3.62□□□□□ -1.83
PER3P56645 AC018437.1-201ENST00000492214 406 ntBASIC3.62□□□□□ -1.83
PER3P56645 RN7SL323P-201ENST00000494712 295 ntBASIC3.62□□□□□ -1.83
PER3P56645 RNU6-120P-201ENST00000516077 103 ntBASIC3.62□□□□□ -1.83
PER3P56645 RNU6-327P-201ENST00000516270 127 ntBASIC3.62□□□□□ -1.83
PER3P56645 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PER3P56645 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.62□□□□□ -1.83
PER3P56645 H3F3AP1-201ENST00000559984 334 ntBASIC3.62□□□□□ -1.83
PER3P56645 CYCSP39-201ENST00000565821 309 ntBASIC3.62□□□□□ -1.83
PER3P56645 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.62□□□□□ -1.83
PER3P56645 AL645944.1-201ENST00000603857 493 ntBASIC3.62□□□□□ -1.83
PER3P56645 AC116312.1-201ENST00000606841 314 ntBASIC3.62□□□□□ -1.83
PER3P56645 U3.45-201ENST00000607547 219 ntBASIC3.62□□□□□ -1.83
PER3P56645 AC133104.2-201ENST00000615272 193 ntBASIC3.62□□□□□ -1.83
PER3P56645 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.62□□□□□ -1.83
PER3P56645 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PER3P56645 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.62□□□□□ -1.83
PER3P56645 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PER3P56645 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PER3P56645 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PER3P56645 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
PER3P56645 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.61□□□□□ -1.83
PER3P56645 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.61□□□□□ -1.83
PER3P56645 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.61□□□□□ -1.83
PER3P56645 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 RNU6-778P-201ENST00000363269 103 ntBASIC3.61□□□□□ -1.83
PER3P56645 SNORA73.2-201ENST00000364946 201 ntBASIC3.61□□□□□ -1.83
PER3P56645 MIR30B-201ENST00000384850 88 ntBASIC3.61□□□□□ -1.83
PER3P56645 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 RPL21P17-201ENST00000397467 475 ntBASIC3.61□□□□□ -1.83
PER3P56645 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 RNU6-325P-201ENST00000411132 105 ntBASIC3.61□□□□□ -1.83
PER3P56645 AC243428.1-201ENST00000421099 264 ntBASIC3.61□□□□□ -1.83
PER3P56645 AL159169.1-201ENST00000421119 127 ntBASIC3.61□□□□□ -1.83
PER3P56645 AC018865.2-201ENST00000423631 129 ntBASIC3.61□□□□□ -1.83
PER3P56645 AC093151.1-201ENST00000427711 313 ntBASIC3.61□□□□□ -1.83
PER3P56645 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.61□□□□□ -1.83
PER3P56645 HMGB1P12-201ENST00000438594 598 ntBASIC3.61□□□□□ -1.83
PER3P56645 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.61□□□□□ -1.83
PER3P56645 NIPA2P5-201ENST00000452282 464 ntBASIC3.61□□□□□ -1.83
PER3P56645 RPL21P104-201ENST00000464143 478 ntBASIC3.61□□□□□ -1.83
PER3P56645 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.61□□□□□ -1.83
PER3P56645 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.61□□□□□ -1.83
PER3P56645 RNU1-95P-201ENST00000516357 160 ntBASIC3.61□□□□□ -1.83
PER3P56645 SCARNA16.2-201ENST00000516520 172 ntBASIC3.61□□□□□ -1.83
PER3P56645 RNU1-128P-201ENST00000516704 160 ntBASIC3.61□□□□□ -1.83
PER3P56645 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.61□□□□□ -1.83
PER3P56645 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.61□□□□□ -1.83
PER3P56645 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.61□□□□□ -1.83
PER3P56645 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.61□□□□□ -1.83
PER3P56645 CPDP1-201ENST00000579660 283 ntBASIC3.61□□□□□ -1.83
PER3P56645 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.61□□□□□ -1.83
PER3P56645 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.61□□□□□ -1.83
PER3P56645 AC064801.1-201ENST00000612025 407 ntBASIC3.61□□□□□ -1.83
PER3P56645 MIR7151-201ENST00000617477 60 ntBASIC3.61□□□□□ -1.83
PER3P56645 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
PER3P56645 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.61□□□□□ -1.83
PER3P56645 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PER3P56645 AC007656.2-201ENST00000624902 4547 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms