Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MIR3942-201ENST00000585264 109 ntBASIC3.98□□□□□ -1.77
CNGA1P29973 AC005261.5-201ENST00000596280 355 ntBASIC3.98□□□□□ -1.77
CNGA1P29973 AL162274.2-201ENST00000614406 332 ntBASIC3.98□□□□□ -1.77
CNGA1P29973 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.98□□□□□ -1.77
CNGA1P29973 XIST_intron.1-201ENST00000619444 68 ntBASIC3.98□□□□□ -1.77
CNGA1P29973 AC092628.2-201ENST00000622492 339 ntBASIC3.98□□□□□ -1.77
CNGA1P29973 AP003355.3-201ENST00000623465 114 ntBASIC3.98□□□□□ -1.77
CNGA1P29973 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.98□□□□□ -1.77
CNGA1P29973 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNGA1P29973 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CNGA1P29973 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CNGA1P29973 AC233263.6-201ENST00000631132 1963 ntBASIC3.98□□□□□ -1.77
CNGA1P29973 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNGA1P29973 MAPK10-322ENST00000641485 4530 ntBASIC3.98□□□□□ -1.77
CNGA1P29973 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC091152.2-201ENST00000591628 2569 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNGA1P29973 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNGA1P29973 RNU6-1252P-201ENST00000363054 104 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 SNORD81.2-201ENST00000365153 76 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 MIR518D-201ENST00000385014 87 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 MIR34A-201ENST00000385130 110 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 RNU6-328P-201ENST00000390887 106 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 RNU6-1009P-201ENST00000390996 107 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 UBA52P6-201ENST00000399822 382 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 RNA5SP31-201ENST00000411144 127 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.97□□□□□ -1.77
CNGA1P29973 AL353678.1-201ENST00000422735 741 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC098831.1-201ENST00000440661 216 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC233279.1-201ENST00000455300 423 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.97□□□□□ -1.77
CNGA1P29973 RNU7-23P-201ENST00000459465 62 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 RNU7-138P-201ENST00000459479 64 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC128713.1-201ENST00000471495 306 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC093663.1-201ENST00000497190 394 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 RNU6-256P-201ENST00000516747 97 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 RNU7-30P-201ENST00000516835 62 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC087854.1-201ENST00000519706 414 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.97□□□□□ -1.77
CNGA1P29973 AC091135.1-201ENST00000585943 307 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC005498.1-201ENST00000592125 465 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 KLKP1-201ENST00000595979 403 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC087045.1-201ENST00000605856 382 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AL022345.1-201ENST00000607292 135 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 RNVU1-4-201ENST00000612985 164 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AC063943.3-201ENST00000615562 356 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 U6.98-201ENST00000637157 84 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 AL732372.2-225ENST00000642124 456 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNGA1P29973 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
CNGA1P29973 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNGA1P29973 AC110491.1-201ENST00000562191 2010 ntBASIC3.97□□□□□ -1.77
CNGA1P29973 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
CNGA1P29973 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNGA1P29973 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.96□□□□□ -1.77
CNGA1P29973 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNGA1P29973 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CNGA1P29973 RNA5SP374-201ENST00000362939 125 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 Y_RNA.301-201ENST00000364990 103 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 RNU6-1013P-201ENST00000384180 107 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 MIR450B-201ENST00000401182 78 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 PGBD4P6-201ENST00000421501 610 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.96□□□□□ -1.78
CNGA1P29973 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.96□□□□□ -1.78
CNGA1P29973 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.96□□□□□ -1.78
CNGA1P29973 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.96□□□□□ -1.78
CNGA1P29973 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.96□□□□□ -1.78
CNGA1P29973 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.96□□□□□ -1.78
CNGA1P29973 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.96□□□□□ -1.78
CNGA1P29973 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.96□□□□□ -1.78
CNGA1P29973 AL049830.2-201ENST00000480072 201 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.96□□□□□ -1.78
CNGA1P29973 RNU6-711P-201ENST00000517255 106 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 IGKV2-26-201ENST00000518305 343 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 RNU6-323P-201ENST00000521915 107 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 LINC00933-203ENST00000559812 219 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 AC026464.5-201ENST00000562497 722 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.96□□□□□ -1.78
CNGA1P29973 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.96□□□□□ -1.78
CNGA1P29973 MIR6134-201ENST00000617606 109 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 Z69720.2-201ENST00000624755 279 ntBASIC3.96□□□□□ -1.78
CNGA1P29973 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNGA1P29973 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.96□□□□□ -1.78
CNGA1P29973 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNGA1P29973 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CNGA1P29973 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNGA1P29973 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNGA1P29973 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNGA1P29973 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CNGA1P29973 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CNGA1P29973 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.95□□□□□ -1.78
CNGA1P29973 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
CNGA1P29973 SNORA14A-201ENST00000364773 135 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 MIR591-201ENST00000385290 95 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 RAP1BP3-201ENST00000407180 549 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 RNU2-41P-201ENST00000410991 178 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 VN1R36P-201ENST00000414936 291 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.95□□□□□ -1.78
CNGA1P29973 AP002884.2-201ENST00000471647 395 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms