Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RXRBP28702 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.88□□□□□ -1.63
RXRBP28702 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
RXRBP28702 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.87□□□□□ -1.63
RXRBP28702 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RXRBP28702 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RXRBP28702 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RXRBP28702 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RXRBP28702 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.87□□□□□ -1.63
RXRBP28702 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.87□□□□□ -1.63
RXRBP28702 RNU6-886P-201ENST00000384319 105 ntBASIC4.87□□□□□ -1.63
RXRBP28702 SNORD58.1-201ENST00000391313 66 ntBASIC4.87□□□□□ -1.63
RXRBP28702 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.87□□□□□ -1.63
RXRBP28702 AC107083.1-201ENST00000439643 279 ntBASIC4.87□□□□□ -1.63
RXRBP28702 AL162389.1-201ENST00000449233 177 ntBASIC4.87□□□□□ -1.63
RXRBP28702 NDUFB1P2-201ENST00000449477 176 ntBASIC4.87□□□□□ -1.63
RXRBP28702 OR2AQ1P-201ENST00000451972 200 ntBASIC4.87□□□□□ -1.63
RXRBP28702 RNU7-138P-201ENST00000459479 64 ntBASIC4.87□□□□□ -1.63
RXRBP28702 AC093663.1-201ENST00000497190 394 ntBASIC4.87□□□□□ -1.63
RXRBP28702 RNU5B-3P-201ENST00000516601 115 ntBASIC4.87□□□□□ -1.63
RXRBP28702 AC090151.1-201ENST00000520784 730 ntBASIC4.87□□□□□ -1.63
RXRBP28702 ERHP1-201ENST00000523006 310 ntBASIC4.87□□□□□ -1.63
RXRBP28702 AC067852.3-201ENST00000589177 561 ntBASIC4.87□□□□□ -1.63
RXRBP28702 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.87□□□□□ -1.63
RXRBP28702 AC007619.2-201ENST00000605743 379 ntBASIC4.87□□□□□ -1.63
RXRBP28702 SNORA62.6-201ENST00000606322 83 ntBASIC4.87□□□□□ -1.63
RXRBP28702 AC064801.1-201ENST00000612025 407 ntBASIC4.87□□□□□ -1.63
RXRBP28702 AC130454.1-201ENST00000622948 401 ntBASIC4.87□□□□□ -1.63
RXRBP28702 AL137790.1-201ENST00000634283 177 ntBASIC4.87□□□□□ -1.63
RXRBP28702 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.87□□□□□ -1.63
RXRBP28702 MAPK10-303ENST00000641324 3959 ntBASIC4.87□□□□□ -1.63
RXRBP28702 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.87□□□□□ -1.63
RXRBP28702 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.87□□□□□ -1.63
RXRBP28702 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RXRBP28702 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
RXRBP28702 AC068254.2-201ENST00000623938 3577 ntBASIC4.86□□□□□ -1.63
RXRBP28702 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.86□□□□□ -1.63
RXRBP28702 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RXRBP28702 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RXRBP28702 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RXRBP28702 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RXRBP28702 SNORD27-201ENST00000363981 72 ntBASIC4.86□□□□□ -1.63
RXRBP28702 RNU6-45P-201ENST00000384471 107 ntBASIC4.86□□□□□ -1.63
RXRBP28702 SNORD17-201ENST00000390930 237 ntBASIC4.86□□□□□ -1.63
RXRBP28702 RNU6-130P-201ENST00000411112 103 ntBASIC4.86□□□□□ -1.63
RXRBP28702 AC104332.1-201ENST00000440471 797 ntBASIC4.86□□□□□ -1.63
RXRBP28702 SNORA40.15-201ENST00000516884 107 ntBASIC4.86□□□□□ -1.63
RXRBP28702 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.86□□□□□ -1.63
RXRBP28702 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.86□□□□□ -1.63
RXRBP28702 VN1R91P-201ENST00000594377 169 ntBASIC4.86□□□□□ -1.63
RXRBP28702 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.86□□□□□ -1.63
RXRBP28702 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.86□□□□□ -1.63
RXRBP28702 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.86□□□□□ -1.63
RXRBP28702 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RXRBP28702 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.86□□□□□ -1.63
RXRBP28702 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.86□□□□□ -1.63
RXRBP28702 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RXRBP28702 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RXRBP28702 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.85□□□□□ -1.63
RXRBP28702 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RXRBP28702 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RXRBP28702 Y_RNA.29-201ENST00000362570 113 ntBASIC4.85□□□□□ -1.63
RXRBP28702 RNY1-201ENST00000364228 113 ntBASIC4.85□□□□□ -1.63
RXRBP28702 RNU6-371P-201ENST00000364283 108 ntBASIC4.85□□□□□ -1.63
RXRBP28702 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
RXRBP28702 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RXRBP28702 LAP3P1-201ENST00000403648 294 ntBASIC4.85□□□□□ -1.63
RXRBP28702 RNU4-65P-201ENST00000410473 140 ntBASIC4.85□□□□□ -1.63
RXRBP28702 RN7SKP167-201ENST00000411047 285 ntBASIC4.85□□□□□ -1.63
RXRBP28702 RPS15AP40-201ENST00000419621 391 ntBASIC4.85□□□□□ -1.63
RXRBP28702 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.85□□□□□ -1.63
RXRBP28702 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.85□□□□□ -1.63
RXRBP28702 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.85□□□□□ -1.63
RXRBP28702 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.85□□□□□ -1.63
RXRBP28702 HMGB1P25-201ENST00000468402 607 ntBASIC4.85□□□□□ -1.63
RXRBP28702 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.85□□□□□ -1.63
RXRBP28702 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.85□□□□□ -1.63
RXRBP28702 AC104576.1-201ENST00000524225 88 ntBASIC4.85□□□□□ -1.63
RXRBP28702 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.85□□□□□ -1.63
RXRBP28702 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.85□□□□□ -1.63
RXRBP28702 AC015813.4-201ENST00000610469 179 ntBASIC4.85□□□□□ -1.63
RXRBP28702 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RXRBP28702 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RXRBP28702 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.85□□□□□ -1.63
RXRBP28702 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RXRBP28702 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RXRBP28702 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.85□□□□□ -1.63
RXRBP28702 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
RXRBP28702 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RXRBP28702 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RXRBP28702 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RXRBP28702 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.84□□□□□ -1.63
RXRBP28702 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RXRBP28702 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
RXRBP28702 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RXRBP28702 MIR422A-201ENST00000362286 90 ntBASIC4.84□□□□□ -1.63
RXRBP28702 RNU6-212P-201ENST00000362642 104 ntBASIC4.84□□□□□ -1.63
RXRBP28702 RNY1P16-201ENST00000363063 111 ntBASIC4.84□□□□□ -1.63
RXRBP28702 RNA5SP235-201ENST00000365411 114 ntBASIC4.84□□□□□ -1.63
RXRBP28702 SNORA51.11-201ENST00000384442 131 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms