Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.42□□□□□ -1.7
NID1P14543 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NID1P14543 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NID1P14543 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NID1P14543 AP001642.1-201ENST00000624727 2117 ntBASIC4.42□□□□□ -1.7
NID1P14543 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NID1P14543 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.42□□□□□ -1.7
NID1P14543 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NID1P14543 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.41□□□□□ -1.7
NID1P14543 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NID1P14543 RNU6-1272P-201ENST00000362776 107 ntBASIC4.41□□□□□ -1.7
NID1P14543 RNU6-137P-201ENST00000363680 108 ntBASIC4.41□□□□□ -1.7
NID1P14543 RNA5SP505-201ENST00000364748 108 ntBASIC4.41□□□□□ -1.7
NID1P14543 SNORA72.2-201ENST00000365028 127 ntBASIC4.41□□□□□ -1.7
NID1P14543 RNU4-11P-201ENST00000365287 132 ntBASIC4.41□□□□□ -1.7
NID1P14543 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.41□□□□□ -1.7
NID1P14543 UBBP2-201ENST00000376781 231 ntBASIC4.41□□□□□ -1.7
NID1P14543 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 RNU6-72P-201ENST00000384285 79 ntBASIC4.41□□□□□ -1.7
NID1P14543 RNU6-159P-201ENST00000391080 106 ntBASIC4.41□□□□□ -1.7
NID1P14543 RPL7AP25-201ENST00000423357 805 ntBASIC4.41□□□□□ -1.7
NID1P14543 TBCAP1-201ENST00000436520 327 ntBASIC4.41□□□□□ -1.7
NID1P14543 AC074290.1-201ENST00000448883 135 ntBASIC4.41□□□□□ -1.7
NID1P14543 AC079168.2-201ENST00000453977 416 ntBASIC4.41□□□□□ -1.7
NID1P14543 Y_RNA.797-201ENST00000515977 94 ntBASIC4.41□□□□□ -1.7
NID1P14543 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.41□□□□□ -1.7
NID1P14543 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.41□□□□□ -1.7
NID1P14543 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.41□□□□□ -1.7
NID1P14543 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.41□□□□□ -1.7
NID1P14543 MIR7703-201ENST00000620784 77 ntBASIC4.41□□□□□ -1.7
NID1P14543 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.41□□□□□ -1.7
NID1P14543 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NID1P14543 AL391516.1-201ENST00000554380 2449 ntBASIC4.41□□□□□ -1.7
NID1P14543 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.4□□□□□ -1.7
NID1P14543 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NID1P14543 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.4□□□□□ -1.7
NID1P14543 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NID1P14543 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NID1P14543 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
NID1P14543 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.4□□□□□ -1.7
NID1P14543 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NID1P14543 AC126755.2-208ENST00000327792 462 ntBASIC4.4□□□□□ -1.71
NID1P14543 AC138969.1-213ENST00000331436 462 ntBASIC4.4□□□□□ -1.71
NID1P14543 RNU1-83P-201ENST00000363426 164 ntBASIC4.4□□□□□ -1.71
NID1P14543 RNU6-173P-201ENST00000364215 104 ntBASIC4.4□□□□□ -1.71
NID1P14543 RNVU1-6-201ENST00000364688 164 ntBASIC4.4□□□□□ -1.71
NID1P14543 SNORA29-201ENST00000384183 140 ntBASIC4.4□□□□□ -1.71
NID1P14543 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.4□□□□□ -1.71
NID1P14543 EBAG9P1-201ENST00000418955 543 ntBASIC4.4□□□□□ -1.71
NID1P14543 RPL17P36-201ENST00000420302 549 ntBASIC4.4□□□□□ -1.71
NID1P14543 AL645608.4-201ENST00000423619 154 ntBASIC4.4□□□□□ -1.71
NID1P14543 RPS15AP5-201ENST00000436276 388 ntBASIC4.4□□□□□ -1.71
NID1P14543 RPS26P2-201ENST00000440331 348 ntBASIC4.4□□□□□ -1.71
NID1P14543 RPS20P10-201ENST00000451209 253 ntBASIC4.4□□□□□ -1.71
NID1P14543 AC108751.2-201ENST00000469993 231 ntBASIC4.4□□□□□ -1.71
NID1P14543 AC139453.3-201ENST00000493276 369 ntBASIC4.4□□□□□ -1.71
NID1P14543 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.4□□□□□ -1.71
NID1P14543 RNA5SP170-201ENST00000517150 101 ntBASIC4.4□□□□□ -1.71
NID1P14543 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.4□□□□□ -1.71
NID1P14543 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.4□□□□□ -1.71
NID1P14543 AC093249.4-201ENST00000564755 259 ntBASIC4.4□□□□□ -1.71
NID1P14543 MIR3145-201ENST00000580727 82 ntBASIC4.4□□□□□ -1.71
NID1P14543 MIR4737-201ENST00000583979 81 ntBASIC4.4□□□□□ -1.71
NID1P14543 AC022726.1-201ENST00000587475 207 ntBASIC4.4□□□□□ -1.71
NID1P14543 AL590392.1-201ENST00000604960 446 ntBASIC4.4□□□□□ -1.71
NID1P14543 AL138963.2-201ENST00000605137 226 ntBASIC4.4□□□□□ -1.71
NID1P14543 MIR7641-1-201ENST00000627518 61 ntBASIC4.4□□□□□ -1.71
NID1P14543 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NID1P14543 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NID1P14543 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NID1P14543 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NID1P14543 AC000123.3-201ENST00000624029 4975 ntBASIC4.4□□□□□ -1.71
NID1P14543 AC110491.1-201ENST00000562191 2010 ntBASIC4.39□□□□□ -1.71
NID1P14543 MAPK10-320ENST00000641462 6696 ntBASIC4.39□□□□□ -1.71
NID1P14543 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.39□□□□□ -1.71
NID1P14543 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NID1P14543 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.39□□□□□ -1.71
NID1P14543 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.39□□□□□ -1.71
NID1P14543 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.39□□□□□ -1.71
NID1P14543 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NID1P14543 SNORA63.4-201ENST00000362763 126 ntBASIC4.39□□□□□ -1.71
NID1P14543 RNU1-32P-201ENST00000363937 159 ntBASIC4.39□□□□□ -1.71
NID1P14543 SNORA20-201ENST00000384662 132 ntBASIC4.39□□□□□ -1.71
NID1P14543 U3.30-201ENST00000391308 210 ntBASIC4.39□□□□□ -1.71
NID1P14543 Z85995.1-201ENST00000415547 335 ntBASIC4.39□□□□□ -1.71
NID1P14543 PTGES3P4-201ENST00000426243 356 ntBASIC4.39□□□□□ -1.71
NID1P14543 Z82210.1-201ENST00000440037 231 ntBASIC4.39□□□□□ -1.71
NID1P14543 AC011753.3-201ENST00000443436 406 ntBASIC4.39□□□□□ -1.71
NID1P14543 AC112498.1-201ENST00000444401 332 ntBASIC4.39□□□□□ -1.71
NID1P14543 AC009963.2-201ENST00000453431 138 ntBASIC4.39□□□□□ -1.71
NID1P14543 AURKAPS2-201ENST00000454983 333 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms