Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 AC012442.3-202ENST00000636742 206 ntBASIC4.88□□□□□ -1.63
NEFMP07197 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.88□□□□□ -1.63
NEFMP07197 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
NEFMP07197 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NEFMP07197 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.87□□□□□ -1.63
NEFMP07197 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NEFMP07197 RNU6-266P-201ENST00000364225 107 ntBASIC4.87□□□□□ -1.63
NEFMP07197 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.87□□□□□ -1.63
NEFMP07197 Y_RNA.480-201ENST00000384364 102 ntBASIC4.87□□□□□ -1.63
NEFMP07197 MIR23B-201ENST00000384832 97 ntBASIC4.87□□□□□ -1.63
NEFMP07197 AL139039.1-201ENST00000401900 692 ntBASIC4.87□□□□□ -1.63
NEFMP07197 AL137014.1-201ENST00000420490 1226 ntBASIC4.87□□□□□ -1.63
NEFMP07197 PSMA2P3-201ENST00000429685 675 ntBASIC4.87□□□□□ -1.63
NEFMP07197 AC011816.1-201ENST00000441346 546 ntBASIC4.87□□□□□ -1.63
NEFMP07197 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.87□□□□□ -1.63
NEFMP07197 SUMO1P2-201ENST00000452524 304 ntBASIC4.87□□□□□ -1.63
NEFMP07197 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.87□□□□□ -1.63
NEFMP07197 RPL37P6-201ENST00000460682 294 ntBASIC4.87□□□□□ -1.63
NEFMP07197 AC008571.1-201ENST00000467232 300 ntBASIC4.87□□□□□ -1.63
NEFMP07197 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NEFMP07197 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.87□□□□□ -1.63
NEFMP07197 RNU6-408P-201ENST00000515910 100 ntBASIC4.87□□□□□ -1.63
NEFMP07197 RNU6-120P-201ENST00000516077 103 ntBASIC4.87□□□□□ -1.63
NEFMP07197 RNU2-53P-201ENST00000516257 147 ntBASIC4.87□□□□□ -1.63
NEFMP07197 RNU6-390P-201ENST00000516259 103 ntBASIC4.87□□□□□ -1.63
NEFMP07197 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NEFMP07197 AC007991.1-201ENST00000522680 631 ntBASIC4.87□□□□□ -1.63
NEFMP07197 AC131281.1-201ENST00000522984 164 ntBASIC4.87□□□□□ -1.63
NEFMP07197 AP003385.6-201ENST00000531603 374 ntBASIC4.87□□□□□ -1.63
NEFMP07197 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.87□□□□□ -1.63
NEFMP07197 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.87□□□□□ -1.63
NEFMP07197 AC016727.2-201ENST00000603988 621 ntBASIC4.87□□□□□ -1.63
NEFMP07197 HMGN2P28-201ENST00000606102 262 ntBASIC4.87□□□□□ -1.63
NEFMP07197 SNORD58B-201ENST00000607313 66 ntBASIC4.87□□□□□ -1.63
NEFMP07197 MIR4275-201ENST00000636486 87 ntBASIC4.87□□□□□ -1.63
NEFMP07197 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NEFMP07197 AC093010.3-201ENST00000570269 15214 ntBASIC4.87□□□□□ -1.63
NEFMP07197 HSPA8P4-201ENST00000511877 1920 ntBASIC4.87□□□□□ -1.63
NEFMP07197 OTUD4P1-201ENST00000237841 3067 ntBASIC4.87□□□□□ -1.63
NEFMP07197 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NEFMP07197 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NEFMP07197 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.86□□□□□ -1.63
NEFMP07197 RNU6-989P-201ENST00000362756 107 ntBASIC4.86□□□□□ -1.63
NEFMP07197 Y_RNA.447-201ENST00000384184 113 ntBASIC4.86□□□□□ -1.63
NEFMP07197 AC110754.1-201ENST00000399740 601 ntBASIC4.86□□□□□ -1.63
NEFMP07197 AC096664.2-201ENST00000411843 406 ntBASIC4.86□□□□□ -1.63
NEFMP07197 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.86□□□□□ -1.63
NEFMP07197 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.86□□□□□ -1.63
NEFMP07197 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.86□□□□□ -1.63
NEFMP07197 SNORD105B-201ENST00000458770 79 ntBASIC4.86□□□□□ -1.63
NEFMP07197 RNU7-138P-201ENST00000459479 64 ntBASIC4.86□□□□□ -1.63
NEFMP07197 AC091153.1-201ENST00000466297 402 ntBASIC4.86□□□□□ -1.63
NEFMP07197 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.86□□□□□ -1.63
NEFMP07197 RNU6-1143P-201ENST00000516125 104 ntBASIC4.86□□□□□ -1.63
NEFMP07197 AC008011.1-201ENST00000545989 227 ntBASIC4.86□□□□□ -1.63
NEFMP07197 AC067852.3-201ENST00000589177 561 ntBASIC4.86□□□□□ -1.63
NEFMP07197 IGHV3-29-201ENST00000604817 344 ntBASIC4.86□□□□□ -1.63
NEFMP07197 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NEFMP07197 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NEFMP07197 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NEFMP07197 MTND5P7-201ENST00000413558 1798 ntBASIC4.86□□□□□ -1.63
NEFMP07197 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.85□□□□□ -1.63
NEFMP07197 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NEFMP07197 RNA5SP51-201ENST00000364750 119 ntBASIC4.85□□□□□ -1.63
NEFMP07197 RNU6-45P-201ENST00000384471 107 ntBASIC4.85□□□□□ -1.63
NEFMP07197 HSPE1P8-201ENST00000406997 288 ntBASIC4.85□□□□□ -1.63
NEFMP07197 MIR1252-201ENST00000408861 65 ntBASIC4.85□□□□□ -1.63
NEFMP07197 ATP5A1P2-201ENST00000412323 255 ntBASIC4.85□□□□□ -1.63
NEFMP07197 AC099677.1-201ENST00000420575 175 ntBASIC4.85□□□□□ -1.63
NEFMP07197 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.85□□□□□ -1.63
NEFMP07197 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.85□□□□□ -1.63
NEFMP07197 AL353752.1-201ENST00000454946 260 ntBASIC4.85□□□□□ -1.63
NEFMP07197 RNU6-953P-201ENST00000459154 107 ntBASIC4.85□□□□□ -1.63
NEFMP07197 RN7SKP60-201ENST00000516985 239 ntBASIC4.85□□□□□ -1.63
NEFMP07197 AC069113.1-201ENST00000517763 267 ntBASIC4.85□□□□□ -1.63
NEFMP07197 AC026403.1-201ENST00000518938 295 ntBASIC4.85□□□□□ -1.63
NEFMP07197 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.85□□□□□ -1.63
NEFMP07197 AC026470.2-201ENST00000561492 181 ntBASIC4.85□□□□□ -1.63
NEFMP07197 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.85□□□□□ -1.63
NEFMP07197 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.85□□□□□ -1.63
NEFMP07197 AC008739.3-201ENST00000603262 127 ntBASIC4.85□□□□□ -1.63
NEFMP07197 AC004805.2-201ENST00000605382 482 ntBASIC4.85□□□□□ -1.63
NEFMP07197 SNORA51-201ENST00000606420 132 ntBASIC4.85□□□□□ -1.63
NEFMP07197 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.85□□□□□ -1.63
NEFMP07197 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
NEFMP07197 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEFMP07197 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.84□□□□□ -1.63
NEFMP07197 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEFMP07197 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NEFMP07197 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.84□□□□□ -1.63
NEFMP07197 Y_RNA.106-201ENST00000363189 100 ntBASIC4.84□□□□□ -1.63
NEFMP07197 RNU6-1059P-201ENST00000363752 98 ntBASIC4.84□□□□□ -1.63
NEFMP07197 Y_RNA.210-201ENST00000364161 110 ntBASIC4.84□□□□□ -1.63
NEFMP07197 SNORA23-201ENST00000365128 182 ntBASIC4.84□□□□□ -1.63
NEFMP07197 Y_RNA.396-201ENST00000383949 103 ntBASIC4.84□□□□□ -1.63
NEFMP07197 RNU6-842P-201ENST00000384269 107 ntBASIC4.84□□□□□ -1.63
NEFMP07197 Y_RNA.485-201ENST00000384395 102 ntBASIC4.84□□□□□ -1.63
NEFMP07197 Y_RNA.512-201ENST00000384518 102 ntBASIC4.84□□□□□ -1.63
NEFMP07197 RNU6-817P-201ENST00000391083 104 ntBASIC4.84□□□□□ -1.63
NEFMP07197 MIR548I3-201ENST00000408378 149 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms