Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.57□□□□□ -2
PDGFBP01127 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.57□□□□□ -2
PDGFBP01127 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.57□□□□□ -2
PDGFBP01127 AC021739.1-201ENST00000559631 174 ntBASIC2.57□□□□□ -2
PDGFBP01127 AC023824.2-201ENST00000566185 400 ntBASIC2.57□□□□□ -2
PDGFBP01127 MIR4528-201ENST00000577763 90 ntBASIC2.57□□□□□ -2
PDGFBP01127 MIR3167-201ENST00000579623 85 ntBASIC2.57□□□□□ -2
PDGFBP01127 MIR3682-201ENST00000581338 84 ntBASIC2.57□□□□□ -2
PDGFBP01127 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.57□□□□□ -2
PDGFBP01127 AL139286.2-201ENST00000606838 396 ntBASIC2.57□□□□□ -2
PDGFBP01127 AC245008.1-201ENST00000608123 476 ntBASIC2.57□□□□□ -2
PDGFBP01127 AC103591.3-201ENST00000608684 209 ntBASIC2.57□□□□□ -2
PDGFBP01127 AC004908.3-201ENST00000610248 625 ntBASIC2.57□□□□□ -2
PDGFBP01127 AC104237.2-201ENST00000612456 443 ntBASIC2.57□□□□□ -2
PDGFBP01127 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PDGFBP01127 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.57□□□□□ -2
PDGFBP01127 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.57□□□□□ -2
PDGFBP01127 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
PDGFBP01127 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.57□□□□□ -2
PDGFBP01127 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
PDGFBP01127 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
PDGFBP01127 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.56□□□□□ -2
PDGFBP01127 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.56□□□□□ -2
PDGFBP01127 AP006437.1-201ENST00000641440 3685 ntBASIC2.56□□□□□ -2
PDGFBP01127 RNU6-1159P-201ENST00000362933 107 ntBASIC2.56□□□□□ -2
PDGFBP01127 RNU6-511P-201ENST00000363496 107 ntBASIC2.56□□□□□ -2
PDGFBP01127 RNU5E-6P-201ENST00000365574 115 ntBASIC2.56□□□□□ -2
PDGFBP01127 SMIM11P1-201ENST00000369586 178 ntBASIC2.56□□□□□ -2
PDGFBP01127 RNU6-658P-201ENST00000384606 106 ntBASIC2.56□□□□□ -2
PDGFBP01127 RNU2-8P-201ENST00000410727 190 ntBASIC2.56□□□□□ -2
PDGFBP01127 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.56□□□□□ -2
PDGFBP01127 AC137499.1-201ENST00000427602 88 ntBASIC2.56□□□□□ -2
PDGFBP01127 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.56□□□□□ -2
PDGFBP01127 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
PDGFBP01127 AL592045.1-201ENST00000429867 352 ntBASIC2.56□□□□□ -2
PDGFBP01127 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.56□□□□□ -2
PDGFBP01127 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.56□□□□□ -2
PDGFBP01127 MTND1P12-201ENST00000455231 147 ntBASIC2.56□□□□□ -2
PDGFBP01127 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.56□□□□□ -2
PDGFBP01127 RPL9P6-201ENST00000492764 598 ntBASIC2.56□□□□□ -2
PDGFBP01127 GZMAP1-201ENST00000503054 631 ntBASIC2.56□□□□□ -2
PDGFBP01127 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.56□□□□□ -2
PDGFBP01127 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.56□□□□□ -2
PDGFBP01127 ARL2BPP4-201ENST00000506854 471 ntBASIC2.56□□□□□ -2
PDGFBP01127 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.56□□□□□ -2
PDGFBP01127 Y_RNA.689-201ENST00000516589 107 ntBASIC2.56□□□□□ -2
PDGFBP01127 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PDGFBP01127 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.56□□□□□ -2
PDGFBP01127 NBR2-204ENST00000587322 63 ntBASIC2.56□□□□□ -2
PDGFBP01127 AC005046.1-201ENST00000608515 625 ntBASIC2.56□□□□□ -2
PDGFBP01127 AC090115.4-201ENST00000609970 188 ntBASIC2.56□□□□□ -2
PDGFBP01127 AC069234.5-201ENST00000611056 416 ntBASIC2.56□□□□□ -2
PDGFBP01127 uc_338.14-201ENST00000613162 166 ntBASIC2.56□□□□□ -2
PDGFBP01127 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.56□□□□□ -2
PDGFBP01127 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.56□□□□□ -2
PDGFBP01127 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.56□□□□□ -2
PDGFBP01127 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PDGFBP01127 NACAP2-201ENST00000318548 624 ntBASIC2.55□□□□□ -2
PDGFBP01127 SNORA38-201ENST00000363946 132 ntBASIC2.55□□□□□ -2
PDGFBP01127 RNU6-946P-201ENST00000383878 107 ntBASIC2.55□□□□□ -2
PDGFBP01127 SNORA75-201ENST00000384158 137 ntBASIC2.55□□□□□ -2
PDGFBP01127 DEFB108C-201ENST00000400154 252 ntBASIC2.55□□□□□ -2
PDGFBP01127 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PDGFBP01127 USP9YP6-201ENST00000413550 854 ntBASIC2.55□□□□□ -2
PDGFBP01127 USP9YP20-201ENST00000419224 558 ntBASIC2.55□□□□□ -2
PDGFBP01127 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.55□□□□□ -2
PDGFBP01127 DLGAP5P1-201ENST00000430307 464 ntBASIC2.55□□□□□ -2
PDGFBP01127 AC009961.2-201ENST00000435771 251 ntBASIC2.55□□□□□ -2
PDGFBP01127 RPL39P40-201ENST00000445481 146 ntBASIC2.55□□□□□ -2
PDGFBP01127 AC139453.3-201ENST00000493276 369 ntBASIC2.55□□□□□ -2
PDGFBP01127 SCARNA24.1-201ENST00000516465 137 ntBASIC2.55□□□□□ -2
PDGFBP01127 RNU6-1092P-201ENST00000516955 87 ntBASIC2.55□□□□□ -2
PDGFBP01127 BTF3P12-201ENST00000519620 469 ntBASIC2.55□□□□□ -2
PDGFBP01127 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.55□□□□□ -2
PDGFBP01127 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.55□□□□□ -2
PDGFBP01127 AC006199.1-201ENST00000548728 219 ntBASIC2.55□□□□□ -2
PDGFBP01127 AC087883.1-201ENST00000551882 391 ntBASIC2.55□□□□□ -2
PDGFBP01127 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.55□□□□□ -2
PDGFBP01127 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.55□□□□□ -2
PDGFBP01127 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.55□□□□□ -2
PDGFBP01127 NRBF2P1-201ENST00000587407 859 ntBASIC2.55□□□□□ -2
PDGFBP01127 AC080013.6-201ENST00000606185 215 ntBASIC2.55□□□□□ -2
PDGFBP01127 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.55□□□□□ -2
PDGFBP01127 AC046143.2-201ENST00000609789 160 ntBASIC2.55□□□□□ -2
PDGFBP01127 AL359198.2-201ENST00000611836 194 ntBASIC2.55□□□□□ -2
PDGFBP01127 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PDGFBP01127 AC048344.4-201ENST00000619744 527 ntBASIC2.55□□□□□ -2
PDGFBP01127 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.55□□□□□ -2
PDGFBP01127 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.55□□□□□ -2
PDGFBP01127 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PDGFBP01127 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PDGFBP01127 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.55□□□□□ -2
PDGFBP01127 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
PDGFBP01127 MTND5P6-201ENST00000422338 1798 ntBASIC2.54□□□□□ -2
PDGFBP01127 FARSBP1-201ENST00000435808 1778 ntBASIC2.54□□□□□ -2
PDGFBP01127 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDGFBP01127 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDGFBP01127 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.54□□□□□ -2
PDGFBP01127 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.54□□□□□ -2
PDGFBP01127 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms