Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.53□□□□□ -1.68
SOX1O00570 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SOX1O00570 AL592437.2-201ENST00000421655 2434 ntBASIC4.53□□□□□ -1.68
SOX1O00570 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.53□□□□□ -1.68
SOX1O00570 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SOX1O00570 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SOX1O00570 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.52□□□□□ -1.69
SOX1O00570 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SOX1O00570 RNA5SP175-201ENST00000364275 119 ntBASIC4.52□□□□□ -1.69
SOX1O00570 RNA5SP267-201ENST00000364893 126 ntBASIC4.52□□□□□ -1.69
SOX1O00570 RNA5SP235-201ENST00000365411 114 ntBASIC4.52□□□□□ -1.69
SOX1O00570 SNORD78.2-201ENST00000391076 69 ntBASIC4.52□□□□□ -1.69
SOX1O00570 AL033519.2-201ENST00000403958 392 ntBASIC4.52□□□□□ -1.69
SOX1O00570 RNU2-20P-201ENST00000410425 191 ntBASIC4.52□□□□□ -1.69
SOX1O00570 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.52□□□□□ -1.69
SOX1O00570 RPS20P14-201ENST00000412545 360 ntBASIC4.52□□□□□ -1.69
SOX1O00570 AL356867.1-201ENST00000429623 299 ntBASIC4.52□□□□□ -1.69
SOX1O00570 TBCAP1-201ENST00000436520 327 ntBASIC4.52□□□□□ -1.69
SOX1O00570 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.52□□□□□ -1.69
SOX1O00570 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX1O00570 U8.22-201ENST00000459141 133 ntBASIC4.52□□□□□ -1.69
SOX1O00570 RN7SL812P-201ENST00000493791 279 ntBASIC4.52□□□□□ -1.69
SOX1O00570 RNU6-496P-201ENST00000516145 99 ntBASIC4.52□□□□□ -1.69
SOX1O00570 RNA5SP73-201ENST00000516744 108 ntBASIC4.52□□□□□ -1.69
SOX1O00570 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.52□□□□□ -1.69
SOX1O00570 MIR4659A-201ENST00000580269 81 ntBASIC4.52□□□□□ -1.69
SOX1O00570 AC010620.2-201ENST00000600135 313 ntBASIC4.52□□□□□ -1.69
SOX1O00570 RNA5SP108-201ENST00000605921 117 ntBASIC4.52□□□□□ -1.69
SOX1O00570 MIR7151-201ENST00000617477 60 ntBASIC4.52□□□□□ -1.69
SOX1O00570 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SOX1O00570 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 U4.7-201ENST00000638126 106 ntBASIC4.52□□□□□ -1.69
SOX1O00570 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SOX1O00570 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SOX1O00570 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SOX1O00570 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SOX1O00570 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX1O00570 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SOX1O00570 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SOX1O00570 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SOX1O00570 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.51□□□□□ -1.69
SOX1O00570 LINC01109-201ENST00000603837 3081 ntBASIC4.51□□□□□ -1.69
SOX1O00570 MIR411-201ENST00000362239 96 ntBASIC4.51□□□□□ -1.69
SOX1O00570 RNU1-20P-201ENST00000363314 162 ntBASIC4.51□□□□□ -1.69
SOX1O00570 RNU5E-7P-201ENST00000365290 117 ntBASIC4.51□□□□□ -1.69
SOX1O00570 RNU6-937P-201ENST00000384325 106 ntBASIC4.51□□□□□ -1.69
SOX1O00570 RNU6-166P-201ENST00000384371 107 ntBASIC4.51□□□□□ -1.69
SOX1O00570 BTF3L4P2-201ENST00000392798 346 ntBASIC4.51□□□□□ -1.69
SOX1O00570 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX1O00570 AL606753.1-201ENST00000427435 87 ntBASIC4.51□□□□□ -1.69
SOX1O00570 RNA5SP246-201ENST00000458909 119 ntBASIC4.51□□□□□ -1.69
SOX1O00570 snoU13.30-201ENST00000458951 104 ntBASIC4.51□□□□□ -1.69
SOX1O00570 RN7SL323P-201ENST00000494712 295 ntBASIC4.51□□□□□ -1.69
SOX1O00570 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX1O00570 AC104619.4-201ENST00000510773 249 ntBASIC4.51□□□□□ -1.69
SOX1O00570 AC107393.1-201ENST00000512403 346 ntBASIC4.51□□□□□ -1.69
SOX1O00570 SNORA31.19-201ENST00000517079 126 ntBASIC4.51□□□□□ -1.69
SOX1O00570 AC004024.1-201ENST00000549244 247 ntBASIC4.51□□□□□ -1.69
SOX1O00570 AC023824.2-201ENST00000566185 400 ntBASIC4.51□□□□□ -1.69
SOX1O00570 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.51□□□□□ -1.69
SOX1O00570 AC060766.3-201ENST00000591442 263 ntBASIC4.51□□□□□ -1.69
SOX1O00570 AC097372.5-201ENST00000623665 376 ntBASIC4.51□□□□□ -1.69
SOX1O00570 AC132825.6-201ENST00000638861 357 ntBASIC4.51□□□□□ -1.69
SOX1O00570 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.51□□□□□ -1.69
SOX1O00570 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SOX1O00570 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX1O00570 AC107068.1-201ENST00000563286 4218 ntBASIC4.51□□□□□ -1.69
SOX1O00570 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SOX1O00570 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SOX1O00570 AL731532.2-201ENST00000623542 1953 ntBASIC4.51□□□□□ -1.69
SOX1O00570 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
SOX1O00570 MAPK10-372ENST00000641954 3413 ntBASIC4.5□□□□□ -1.69
SOX1O00570 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SOX1O00570 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX1O00570 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX1O00570 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX1O00570 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SOX1O00570 AL445487.1-201ENST00000415694 1580 ntBASIC4.5□□□□□ -1.69
SOX1O00570 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX1O00570 RNU4-90P-201ENST00000362773 141 ntBASIC4.5□□□□□ -1.69
SOX1O00570 RNU4-9P-201ENST00000364951 139 ntBASIC4.5□□□□□ -1.69
SOX1O00570 RNU6-629P-201ENST00000384061 103 ntBASIC4.5□□□□□ -1.69
SOX1O00570 SNORD63-201ENST00000384262 68 ntBASIC4.5□□□□□ -1.69
SOX1O00570 U3.26-201ENST00000391236 204 ntBASIC4.5□□□□□ -1.69
SOX1O00570 NDUFB4P7-201ENST00000423198 363 ntBASIC4.5□□□□□ -1.69
SOX1O00570 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.5□□□□□ -1.69
SOX1O00570 RPL35AP21-201ENST00000437667 333 ntBASIC4.5□□□□□ -1.69
SOX1O00570 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX1O00570 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.5□□□□□ -1.69
SOX1O00570 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.5□□□□□ -1.69
SOX1O00570 SEPT14P8-201ENST00000508026 178 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms