Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 MIR342-201ENST00000362212 99 ntBASIC6.51□□□□□ -1.37
RNF39Q9H2S5 RNU6-1184P-201ENST00000384588 108 ntBASIC6.51□□□□□ -1.37
RNF39Q9H2S5 MIR1283-1-201ENST00000408494 87 ntBASIC6.51□□□□□ -1.37
RNF39Q9H2S5 RNU4-34P-201ENST00000410431 124 ntBASIC6.51□□□□□ -1.37
RNF39Q9H2S5 RN7SKP206-201ENST00000410823 293 ntBASIC6.51□□□□□ -1.37
RNF39Q9H2S5 CHEK2P5-201ENST00000423877 246 ntBASIC6.51□□□□□ -1.37
RNF39Q9H2S5 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 AC002984.1-201ENST00000591692 448 ntBASIC6.51□□□□□ -1.37
RNF39Q9H2S5 AC096577.2-201ENST00000611455 153 ntBASIC6.51□□□□□ -1.37
RNF39Q9H2S5 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RNF39Q9H2S5 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 SNORA70E-201ENST00000384492 135 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 MIR325-201ENST00000385260 98 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 SNORA17A-201ENST00000391185 133 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 RPS3P1-201ENST00000456781 192 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 AL122020.1-201ENST00000472287 459 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 RN7SL273P-201ENST00000481561 299 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 FGF7P7-201ENST00000514120 227 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 AP003484.1-201ENST00000530974 250 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 SNORA17.5-201ENST00000630429 132 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 SMG1P4-204ENST00000523028 4131 ntBASIC6.5□□□□□ -1.37
RNF39Q9H2S5 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RNF39Q9H2S5 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 OLMALINC-203ENST00000641087 3779 ntBASIC6.49□□□□□ -1.37
RNF39Q9H2S5 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 Y_RNA.40-201ENST00000362645 93 ntBASIC6.49□□□□□ -1.37
RNF39Q9H2S5 Y_RNA.168-201ENST00000363740 102 ntBASIC6.49□□□□□ -1.37
RNF39Q9H2S5 RNA5SP500-201ENST00000364486 119 ntBASIC6.49□□□□□ -1.37
RNF39Q9H2S5 Y_RNA.332-201ENST00000365271 113 ntBASIC6.49□□□□□ -1.37
RNF39Q9H2S5 RNU6-669P-201ENST00000365575 107 ntBASIC6.49□□□□□ -1.37
RNF39Q9H2S5 MIR635-201ENST00000384830 98 ntBASIC6.49□□□□□ -1.37
RNF39Q9H2S5 MIR300-201ENST00000401138 83 ntBASIC6.49□□□□□ -1.37
RNF39Q9H2S5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 IGLV3-30-201ENST00000524362 298 ntBASIC6.49□□□□□ -1.37
RNF39Q9H2S5 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.49□□□□□ -1.37
RNF39Q9H2S5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 AC092881.1-201ENST00000638218 2733 ntBASIC6.48□□□□□ -1.37
RNF39Q9H2S5 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 SNORA1.3-201ENST00000384676 136 ntBASIC6.48□□□□□ -1.37
RNF39Q9H2S5 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 MRPL53P1-201ENST00000414323 319 ntBASIC6.48□□□□□ -1.37
RNF39Q9H2S5 RNU5F-4P-201ENST00000516581 114 ntBASIC6.48□□□□□ -1.37
RNF39Q9H2S5 Y_RNA.714-201ENST00000517065 90 ntBASIC6.48□□□□□ -1.37
RNF39Q9H2S5 RN7SKP98-201ENST00000517070 156 ntBASIC6.48□□□□□ -1.37
RNF39Q9H2S5 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 AP005019.3-201ENST00000620418 560 ntBASIC6.48□□□□□ -1.37
RNF39Q9H2S5 AC138965.3-201ENST00000623875 498 ntBASIC6.48□□□□□ -1.37
RNF39Q9H2S5 AC021613.1-201ENST00000623880 111 ntBASIC6.48□□□□□ -1.37
RNF39Q9H2S5 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RNF39Q9H2S5 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
RNF39Q9H2S5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF39Q9H2S5 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms