Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 HMGN2P47-201ENST00000559378 272 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 COX6CP3-201ENST00000580869 223 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR4270-201ENST00000581799 70 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 SNORD39.4-201ENST00000620099 78 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 uc_338.7-201ENST00000621834 124 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 U3.53-201ENST00000628922 216 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RNF123-214ENST00000629802 207 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF402P-201ENST00000404435 3100 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 MAPK10-328ENST00000641553 4009 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 SMG1P7-201ENST00000565246 2704 ntBASIC1.68□□□□□ -2.14
KRTAP4-3Q9BYR4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC112198.2-201ENST00000426589 6996 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MED23-203ENST00000368058 4576 ntTSL 5 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC022336.2-201ENST00000568966 2538 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 U3.6-201ENST00000363622 211 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 SNORA33-201ENST00000363664 130 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.213-201ENST00000364178 111 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 SNORD115-27-201ENST00000364430 82 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 SNORA72.2-201ENST00000365028 127 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 Y_RNA.366-201ENST00000365540 102 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RNA5SP87-201ENST00000384155 118 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 SNORA72.4-201ENST00000384174 132 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-1207P-201ENST00000384343 107 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR548D2-201ENST00000384955 97 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU1-82P-201ENST00000390851 165 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-816P-201ENST00000390914 107 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-1268P-201ENST00000391214 107 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RNU6-1239P-201ENST00000391310 107 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 MIR891A-201ENST00000401237 79 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RNA5SP113-201ENST00000410486 84 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC110620.1-201ENST00000416042 228 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 YPEL5P1-201ENST00000419731 367 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 DDX39BP1-205ENST00000422507 192 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 AL645608.4-201ENST00000423619 154 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 RPEP3-201ENST00000425462 676 ntBASIC1.67□□□□□ -2.14
KRTAP4-3Q9BYR4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms