Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 Y_RNA.46-201ENST00000362695 102 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL355497.1-201ENST00000406262 551 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL358453.1-201ENST00000422522 250 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL445685.2-201ENST00000422551 342 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 HMGN2P10-201ENST00000448085 265 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 MTATP6P7-201ENST00000453315 681 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL121769.1-201ENST00000469473 401 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 RPS27P21-201ENST00000486977 252 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AC139453.3-201ENST00000493276 369 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AC020699.1-201ENST00000505161 445 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 BTF3P12-201ENST00000519620 469 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL356432.3-201ENST00000568952 465 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL391813.1-201ENST00000603098 260 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 MTND4P27-201ENST00000450813 1354 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 KPNA2P1-201ENST00000458289 1591 ntBASIC2.27□□□□□ -2.05
RPAP1Q9BWH6 AL391994.1-201ENST00000254724 282 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 Y_RNA.18-201ENST00000362461 102 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 NDUFB4P2-201ENST00000509515 391 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 SNORA31.6-201ENST00000516241 130 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 RNU6-1003P-201ENST00000517099 105 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 AL138976.2-201ENST00000563989 694 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 AC023824.2-201ENST00000566185 400 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 AL354943.1-201ENST00000572103 781 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 MIR3146-201ENST00000580367 79 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 AC024619.4-201ENST00000580924 316 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 AC024933.1-201ENST00000608472 348 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 AC108479.2-201ENST00000617314 601 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 AC098657.3-201ENST00000620434 263 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 uc_338.20-201ENST00000621563 178 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.26□□□□□ -2.05
RPAP1Q9BWH6 NACAP2-201ENST00000318548 624 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 RNU6-658P-201ENST00000384606 106 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 RNA5SP489-201ENST00000410986 109 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 AL354941.1-201ENST00000438600 464 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 COX6CP12-201ENST00000446748 202 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 Z73417.1-201ENST00000447373 778 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 RNA5SP364-201ENST00000516938 78 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 RPS3AP4-201ENST00000555161 764 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 AL355598.1-201ENST00000604169 202 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 TUSC7.1-201ENST00000610969 165 ntBASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
RPAP1Q9BWH6 RNY3P13-201ENST00000365542 102 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 RNU1-52P-201ENST00000384190 164 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 SNORA40.18-201ENST00000391200 128 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 RPS20P2-201ENST00000402520 389 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 RNU2-20P-201ENST00000410425 191 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 RNU6-321P-201ENST00000410912 106 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 ELOCP17-201ENST00000414751 326 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 SEPT2P1-201ENST00000419651 180 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AC013410.2-201ENST00000422627 201 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 NEFMP1-201ENST00000443423 1006 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AL606662.1-201ENST00000445763 553 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 RNU7-26P-201ENST00000458980 63 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 SNORD11.1-201ENST00000459482 85 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AC026801.1-201ENST00000497178 464 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 SNORD19.2-201ENST00000516978 73 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AC123904.2-201ENST00000548059 300 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AC009127.3-201ENST00000570531 403 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 MIR4658-201ENST00000584344 65 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 AC025588.2-201ENST00000604851 466 ntBASIC2.24□□□□□ -2.05
RPAP1Q9BWH6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms