Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AC092268.1-201ENST00000342691 405 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 SNORA64.1-201ENST00000362600 132 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 RNU6-245P-201ENST00000384020 107 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 RNU6-356P-201ENST00000384140 107 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 MT-TT-201ENST00000387460 66 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 Y_RNA.584-201ENST00000391090 114 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 GCNT1P4-201ENST00000404096 329 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AL606845.1-201ENST00000404881 255 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 RNU6-710P-201ENST00000410424 105 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 RN7SKP125-201ENST00000410481 302 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 RPL27AP8-201ENST00000424277 446 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 SNRPEP9-201ENST00000436794 238 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AL135790.2-201ENST00000437701 267 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AL031737.1-201ENST00000450125 223 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 RPS23P7-201ENST00000466210 444 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 RPL23AP14-201ENST00000468281 468 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 RN7SKP238-201ENST00000516483 249 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 MIR5688-201ENST00000580619 83 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 IMMP1LP3-201ENST00000604197 224 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 AL359198.2-201ENST00000611836 194 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 MIR6839-201ENST00000620425 113 ntBASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.99□□□□□ -1.77
SSBP4Q9BWG4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AL133243.3-201ENST00000617415 3004 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 ASNSP1-201ENST00000518311 1939 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 MIR450A1-201ENST00000362262 91 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 Y_RNA.35-201ENST00000362601 101 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 RNU6-727P-201ENST00000363592 107 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 RNU6-1205P-201ENST00000363625 106 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 RNY1P11-201ENST00000363759 113 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 RNU6-1048P-201ENST00000364054 107 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 SNORD73B-201ENST00000364394 72 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC007738.1-201ENST00000413892 348 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 Z82198.3-201ENST00000421145 199 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 RPL36AP10-201ENST00000421785 322 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC078809.1-201ENST00000427601 140 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 RPL12P49-201ENST00000441100 121 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AP000705.1-201ENST00000454567 350 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AURKAPS2-201ENST00000454983 333 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC146507.2-201ENST00000460608 476 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 RPS26P39-201ENST00000469206 341 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC146944.2-203ENST00000502493 354 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC139495.1-202ENST00000513164 354 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 MIR6721-201ENST00000617181 87 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC109583.2-201ENST00000617367 129 ntBASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.98□□□□□ -1.77
SSBP4Q9BWG4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSBP4Q9BWG4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSBP4Q9BWG4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSBP4Q9BWG4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSBP4Q9BWG4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSBP4Q9BWG4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SSBP4Q9BWG4 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.97□□□□□ -1.77
SSBP4Q9BWG4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms