Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 RNU6-1080P-201ENST00000383982 107 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 RNU6-217P-201ENST00000384164 104 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 Y_RNA.617-201ENST00000410920 90 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 Y_RNA.622-201ENST00000411091 108 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 CYCSP49-201ENST00000420810 319 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 snoU13.24-201ENST00000458998 104 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 RNU6-1282P-201ENST00000516735 96 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 AC131055.1-201ENST00000584626 316 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 AL031274.2-201ENST00000599419 203 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 AC025754.2-201ENST00000606491 432 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 AL360270.2-201ENST00000562952 5985 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 NOL8P1-201ENST00000508336 3529 ntBASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
MS4A4AQ96JQ5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 Y_RNA.361-201ENST00000365515 120 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 AP002088.1-201ENST00000382740 395 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 MIR548A1-201ENST00000385041 97 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 AL603914.1-201ENST00000401964 204 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 RNU4-64P-201ENST00000410795 131 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 NDUFS5P4-201ENST00000412983 318 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 AC006028.1-201ENST00000438379 402 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 RPS26P45-201ENST00000471748 340 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 AC098976.1-201ENST00000513014 541 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 RNU6-638P-201ENST00000516582 104 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 MIR3160-1-201ENST00000577972 85 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 AC012468.1-201ENST00000604888 430 ntBASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.74□□□□□ -1.49
MS4A4AQ96JQ5 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 RNA5SP447-201ENST00000363749 119 ntBASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 RNU6-383P-201ENST00000410864 94 ntBASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 RPEP3-201ENST00000425462 676 ntBASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 RN7SKP19-201ENST00000516016 252 ntBASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 RNA5SP464-201ENST00000516251 108 ntBASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 MTND6P33-201ENST00000571794 183 ntBASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 MIR548AY-201ENST00000617669 107 ntBASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 AL592437.2-201ENST00000421655 2434 ntBASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 TTC41P-205ENST00000551270 3963 ntBASIC5.73□□□□□ -1.49
MS4A4AQ96JQ5 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A4AQ96JQ5 RNA5SP388-201ENST00000362584 119 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms