Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC092681.1-201ENST00000297369 291 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 RNU5F-3P-201ENST00000363767 117 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 Y_RNA.280-201ENST00000364765 112 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 RNU6-294P-201ENST00000364999 102 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 RNU6-1275P-201ENST00000391087 107 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 U3.37-201ENST00000408528 213 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 U3.40-201ENST00000408706 208 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 RN7SKP202-201ENST00000410439 330 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC096649.2-201ENST00000416186 393 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 EIF4A1P11-201ENST00000451239 222 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 RNA5SP54-201ENST00000516951 92 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC133485.4-201ENST00000561835 220 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC138907.4-201ENST00000570107 226 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 MIR3944-201ENST00000581277 108 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC006380.1-201ENST00000603598 186 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 CR381572.2-201ENST00000624852 397 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC099654.7-201ENST00000635788 2127 ntBASIC5.39□□□□□ -1.55
LRCH3Q96II8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
LRCH3Q96II8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LRCH3Q96II8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
LRCH3Q96II8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRCH3Q96II8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LRCH3Q96II8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LRCH3Q96II8 AC022893.2-201ENST00000564832 3296 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 RNU6-1074P-201ENST00000383995 104 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 SNORA72.4-201ENST00000384174 132 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 RNU6-837P-201ENST00000391056 108 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 AL355497.1-201ENST00000406262 551 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 RNA5SP31-201ENST00000411144 127 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 AC079780.1-201ENST00000428259 207 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 FTH1P6-201ENST00000430768 320 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 BX323845.1-201ENST00000432417 179 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.38□□□□□ -1.55
LRCH3Q96II8 GPM6BP3-201ENST00000442797 145 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 AL158147.1-201ENST00000443970 75 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 AL590399.6-201ENST00000446396 307 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 RN7SL132P-201ENST00000478131 296 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 RNU6-762P-201ENST00000517107 102 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 RNU2-12P-201ENST00000517216 168 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 RNU2-60P-201ENST00000517290 128 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 MIR3124-201ENST00000582636 67 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 U73479.1-201ENST00000618062 168 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 AC106754.2-201ENST00000623006 233 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LRCH3Q96II8 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRCH3Q96II8 CENPCP1-201ENST00000533085 2578 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 SCARNA15-201ENST00000607520 4325 ntBASIC5.38□□□□□ -1.55
LRCH3Q96II8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LRCH3Q96II8 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LRCH3Q96II8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.38□□□□□ -1.55
LRCH3Q96II8 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LRCH3Q96II8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LRCH3Q96II8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LRCH3Q96II8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.37□□□□□ -1.55
LRCH3Q96II8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRCH3Q96II8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRCH3Q96II8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LRCH3Q96II8 MIR526A2-201ENST00000390198 65 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 AL592291.1-201ENST00000403830 352 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 AL606845.1-201ENST00000404881 255 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 CRYBB2P1-203ENST00000415709 538 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 AC074117.2-201ENST00000417130 397 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 AC090602.1-201ENST00000469695 252 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 AC091179.3-201ENST00000474761 144 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 RPS4XP13-201ENST00000483219 789 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 SCARNA15.2-201ENST00000516409 127 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 RNU6-1061P-201ENST00000516530 99 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 FTH1P11-201ENST00000517577 551 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 MRPL49P2-201ENST00000521066 465 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 AP004607.1-201ENST00000524456 203 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.37□□□□□ -1.55
LRCH3Q96II8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.37□□□□□ -1.55
LRCH3Q96II8 AC114781.5-201ENST00000615297 108 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 AC024581.2-201ENST00000619986 252 ntBASIC5.37□□□□□ -1.55
LRCH3Q96II8 AC012640.5-201ENST00000623897 319 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms