Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 U3.32-201ENST00000408116 212 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 RPL37P18-201ENST00000411602 243 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 BPY2DP-201ENST00000422208 265 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 SRSF1P1-201ENST00000424058 520 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AL139148.1-201ENST00000427122 680 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AP001025.1-201ENST00000486139 332 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 SNORA27.4-201ENST00000516650 95 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AC087441.2-201ENST00000529141 262 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AC024940.3-201ENST00000538551 316 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AC021739.1-201ENST00000559631 174 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AC008749.1-201ENST00000597650 306 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 AL590240.4-201ENST00000616908 390 ntBASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.73□□□□□ -1.65
DEPDC4Q8N2C3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AL672296.1-201ENST00000427780 2158 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AC126755.2-208ENST00000327792 462 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AC138969.1-213ENST00000331436 462 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-1285P-201ENST00000363480 105 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 RNU6-961P-201ENST00000363893 105 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 Y_RNA.446-201ENST00000384178 104 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AC112220.1-201ENST00000434628 355 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AC012308.1-201ENST00000451232 178 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 Y_RNA.638-201ENST00000459374 113 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AC091959.1-201ENST00000495857 238 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 SNORD116-28-201ENST00000516123 91 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 Y_RNA.679-201ENST00000516416 91 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 RNA5SP360-201ENST00000516555 118 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AC233702.2-202ENST00000562547 291 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AC136624.4-201ENST00000573044 370 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AL359198.2-201ENST00000611836 194 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AL021997.2-201ENST00000615674 271 ntBASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
DEPDC4Q8N2C3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
DEPDC4Q8N2C3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
DEPDC4Q8N2C3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
DEPDC4Q8N2C3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
DEPDC4Q8N2C3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
DEPDC4Q8N2C3 CUL1P1-201ENST00000509510 2425 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RNA5SP335-201ENST00000363817 110 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-213P-201ENST00000384051 104 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-125P-201ENST00000384505 107 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 Y_RNA.595-201ENST00000410403 105 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-1140P-201ENST00000410517 106 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RPL23AP27-201ENST00000415161 451 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AC012306.1-201ENST00000423267 114 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 SNRPGP7-201ENST00000469016 106 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 S100A11P1-201ENST00000477525 312 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AC074133.1-201ENST00000515696 183 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RNU5F-8P-201ENST00000515941 111 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RNU6-861P-201ENST00000516745 106 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RN7SKP289-201ENST00000517244 295 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 HIGD1AP1-201ENST00000550979 275 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AC090897.2-201ENST00000581715 130 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AC005176.2-201ENST00000596933 147 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AL591034.3-201ENST00000605511 685 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AC010999.1-201ENST00000611856 324 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RPSAP73-201ENST00000614820 330 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 IGHVIII-44-202ENST00000636235 289 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 U6.106-201ENST00000636360 105 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
DEPDC4Q8N2C3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.7□□□□□ -1.66
DEPDC4Q8N2C3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms