Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC109327.1-201ENST00000471666 403 ntBASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 RPS4XP13-201ENST00000483219 789 ntBASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 APOOP4-201ENST00000513530 597 ntBASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 SCARNA8-201ENST00000515924 131 ntBASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 RNA5SP464-201ENST00000516251 108 ntBASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 AL157871.3-201ENST00000557231 293 ntBASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 MIR1273C-201ENST00000578669 77 ntBASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 AL022322.2-201ENST00000624072 20397 ntBASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
NPAS3Q8IXF0 ZNF137P-201ENST00000456718 1920 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 UBE2L2-201ENST00000254302 429 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 Y_RNA.101-201ENST00000363154 102 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 Y_RNA.293-201ENST00000364908 93 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 SNORA71.2-201ENST00000364941 134 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 RNU6-643P-201ENST00000384018 107 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 RNU6-281P-201ENST00000384212 103 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 MIR1193-201ENST00000408109 78 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 HMGN2P32-201ENST00000444648 269 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 AC245047.8-201ENST00000456455 284 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 AC023424.1-201ENST00000496058 459 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 RNU6-377P-201ENST00000515965 102 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 AL020997.2-201ENST00000602607 184 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 AL357075.2-201ENST00000614906 189 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 BX005214.3-202ENST00000619809 325 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 AC011944.2-201ENST00000624440 683 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 PCAT14-202ENST00000627127 3935 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 OR14L1P-202ENST00000641545 3009 ntBASIC4.89□□□□□ -1.63
NPAS3Q8IXF0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 ZFRP1-201ENST00000457579 2970 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 Y_RNA.24-201ENST00000362508 103 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 Y_RNA.33-201ENST00000362591 102 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 RNU6-1145P-201ENST00000384246 107 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 RNU6-880P-201ENST00000384526 107 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 RNU6-19P-201ENST00000384718 107 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 SNORD72-201ENST00000390994 80 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 RPL17P36-201ENST00000420302 549 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 RNU6-155P-201ENST00000516347 100 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 RNU6-143P-201ENST00000516942 93 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 AC008489.1-201ENST00000524271 483 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 MIR3646-201ENST00000578301 84 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 AC006272.2-201ENST00000594725 163 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 AL391813.1-201ENST00000603098 260 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 U3.53-201ENST00000628922 216 ntBASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NPAS3Q8IXF0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 AC068700.1-201ENST00000565862 3754 ntBASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPAS3Q8IXF0 Z82209.1-201ENST00000422141 2135 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms