Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SNORD115-32-201ENST00000364079 82 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 U3.15-201ENST00000365398 212 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 RNU6-1286P-201ENST00000383871 107 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 RNU6-926P-201ENST00000384075 107 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 RNU6-843P-201ENST00000384454 104 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDH1Q08174 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.38□□□□□ -1.71
PCDH1Q08174 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH1Q08174 AC245028.1-201ENST00000423259 256 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.38□□□□□ -1.71
PCDH1Q08174 AC016700.2-201ENST00000446011 156 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 AC006026.2-201ENST00000457376 180 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 RN7SL41P-201ENST00000476144 297 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 AL132838.2-201ENST00000492041 314 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 RNU6-255P-201ENST00000516957 105 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 AP004607.1-201ENST00000524456 203 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 AP002392.1-201ENST00000537692 208 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDH1Q08174 CYCSP39-201ENST00000565821 309 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 RPL23AP97-201ENST00000568955 471 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.38□□□□□ -1.71
PCDH1Q08174 MIR3910-1-201ENST00000580936 111 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PCDH1Q08174 AC091905.2-201ENST00000623143 306 ntBASIC4.38□□□□□ -1.71
PCDH1Q08174 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH1Q08174 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH1Q08174 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH1Q08174 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH1Q08174 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PCDH1Q08174 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PCDH1Q08174 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
PCDH1Q08174 MAPK10-303ENST00000641324 3959 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.37□□□□□ -1.71
PCDH1Q08174 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PCDH1Q08174 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 Y_RNA.44-201ENST00000362676 108 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 Y_RNA.76-201ENST00000362931 109 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 RNU6-879P-201ENST00000364328 108 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 SNORA71.2-201ENST00000364941 134 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.37□□□□□ -1.71
PCDH1Q08174 RNU6-318P-201ENST00000384283 103 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 MIR32-201ENST00000384965 70 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 EIF1AXP1-201ENST00000419267 435 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 EIF1P2-201ENST00000428233 350 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 RPS15AP7-201ENST00000439294 405 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 AL451050.1-201ENST00000450126 415 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 UBE2CP3-201ENST00000502715 450 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 SEPT14P8-201ENST00000508026 178 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 RNU6-703P-201ENST00000516946 107 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 RNU6-1212P-201ENST00000517023 104 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH1Q08174 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH1Q08174 AC107016.1-201ENST00000550463 337 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.37□□□□□ -1.71
PCDH1Q08174 MIR6891-201ENST00000618788 93 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.37□□□□□ -1.71
PCDH1Q08174 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PCDH1Q08174 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDH1Q08174 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.37□□□□□ -1.71
PCDH1Q08174 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
PCDH1Q08174 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDH1Q08174 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDH1Q08174 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH1Q08174 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH1Q08174 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH1Q08174 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
PCDH1Q08174 RNA5SP307-201ENST00000362863 116 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 SNORD113.2-201ENST00000364166 89 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDH1Q08174 RNU6-187P-201ENST00000384139 106 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 SNORA53-201ENST00000391141 249 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDH1Q08174 AC011742.1-201ENST00000431448 434 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 AC005002.2-201ENST00000438228 269 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 AL162591.2-201ENST00000449634 317 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.36□□□□□ -1.71
PCDH1Q08174 RPL7P49-201ENST00000471402 708 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 AC006463.2-201ENST00000473326 348 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 RPL30P1-201ENST00000488676 339 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 VWA8P1-201ENST00000510889 176 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 AC107393.1-201ENST00000512403 346 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 RNU6-1183P-201ENST00000517054 60 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.36□□□□□ -1.71
PCDH1Q08174 AC024405.2-202ENST00000532731 184 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDH1Q08174 MIR3133-201ENST00000583157 78 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.36□□□□□ -1.71
PCDH1Q08174 MIR7154-201ENST00000620673 73 ntBASIC4.36□□□□□ -1.71
PCDH1Q08174 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PCDH1Q08174 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PCDH1Q08174 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
PCDH1Q08174 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms