Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SCARNA15.2-201ENST00000516409 127 ntBASIC0.65□□□□□ -2.31
UBA52P62987 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.65□□□□□ -2.31
UBA52P62987 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.65□□□□□ -2.31
UBA52P62987 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
UBA52P62987 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.65□□□□□ -2.31
UBA52P62987 AC090517.3-201ENST00000625170 141 ntBASIC0.65□□□□□ -2.31
UBA52P62987 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.65□□□□□ -2.31
UBA52P62987 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.65□□□□□ -2.31
UBA52P62987 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
UBA52P62987 SNORA29-201ENST00000384183 140 ntBASIC0.64□□□□□ -2.31
UBA52P62987 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
UBA52P62987 MIR888-201ENST00000401186 77 ntBASIC0.64□□□□□ -2.31
UBA52P62987 EBAG9P1-201ENST00000418955 543 ntBASIC0.64□□□□□ -2.31
UBA52P62987 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.64□□□□□ -2.31
UBA52P62987 RPP40P1-201ENST00000426762 456 ntBASIC0.64□□□□□ -2.31
UBA52P62987 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.64□□□□□ -2.31
UBA52P62987 MTCO2P20-201ENST00000437339 673 ntBASIC0.64□□□□□ -2.31
UBA52P62987 AL161788.1-201ENST00000441805 169 ntBASIC0.64□□□□□ -2.31
UBA52P62987 AC068135.1-201ENST00000446164 246 ntBASIC0.64□□□□□ -2.31
UBA52P62987 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.64□□□□□ -2.31
UBA52P62987 SUMO1P1-201ENST00000497904 306 ntBASIC0.64□□□□□ -2.31
UBA52P62987 HSPA8P13-201ENST00000523715 472 ntBASIC0.64□□□□□ -2.31
UBA52P62987 DEFB108E-201ENST00000524692 240 ntBASIC0.64□□□□□ -2.31
UBA52P62987 CENPUP1-201ENST00000526649 1202 ntBASIC0.64□□□□□ -2.31
UBA52P62987 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.64□□□□□ -2.31
UBA52P62987 AL359212.1-201ENST00000556608 614 ntBASIC0.64□□□□□ -2.31
UBA52P62987 MIR6513-201ENST00000621188 64 ntBASIC0.64□□□□□ -2.31
UBA52P62987 RNU6-439P-201ENST00000384188 106 ntBASIC0.63□□□□□ -2.31
UBA52P62987 RNA5SP501-201ENST00000410990 112 ntBASIC0.63□□□□□ -2.31
UBA52P62987 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.63□□□□□ -2.31
UBA52P62987 AC006461.1-201ENST00000412637 326 ntBASIC0.63□□□□□ -2.31
UBA52P62987 POLR2J4-204ENST00000418424 324 ntBASIC0.63□□□□□ -2.31
UBA52P62987 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
UBA52P62987 ZNF863P-201ENST00000426746 417 ntBASIC0.63□□□□□ -2.31
UBA52P62987 FO393419.3-201ENST00000428741 282 ntBASIC0.63□□□□□ -2.31
UBA52P62987 AC005534.2-201ENST00000431047 433 ntBASIC0.63□□□□□ -2.31
UBA52P62987 MTCO1P53-201ENST00000441633 699 ntBASIC0.63□□□□□ -2.31
UBA52P62987 AC079140.2-201ENST00000506193 142 ntBASIC0.63□□□□□ -2.31
UBA52P62987 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
UBA52P62987 RNU6-1256P-201ENST00000516539 103 ntBASIC0.63□□□□□ -2.31
UBA52P62987 SNORA48.11-201ENST00000517015 89 ntBASIC0.63□□□□□ -2.31
UBA52P62987 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.63□□□□□ -2.31
UBA52P62987 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.63□□□□□ -2.31
UBA52P62987 AC093510.2-201ENST00000562820 896 ntBASIC0.63□□□□□ -2.31
UBA52P62987 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.63□□□□□ -2.31
UBA52P62987 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.63□□□□□ -2.31
UBA52P62987 AC243773.3-201ENST00000613270 256 ntBASIC0.63□□□□□ -2.31
UBA52P62987 AC007742.2-201ENST00000618226 398 ntBASIC0.63□□□□□ -2.31
UBA52P62987 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
UBA52P62987 AC007490.1-201ENST00000624321 703 ntBASIC0.63□□□□□ -2.31
UBA52P62987 MIR6866-201ENST00000638146 69 ntBASIC0.63□□□□□ -2.31
UBA52P62987 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
UBA52P62987 RNU5A-1-201ENST00000362698 116 ntBASIC0.62□□□□□ -2.31
UBA52P62987 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
UBA52P62987 RNU6-26P-201ENST00000383985 107 ntBASIC0.62□□□□□ -2.31
UBA52P62987 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
UBA52P62987 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
UBA52P62987 Z86062.1-201ENST00000406773 777 ntBASIC0.62□□□□□ -2.31
UBA52P62987 RNU2-43P-201ENST00000410306 190 ntBASIC0.62□□□□□ -2.31
UBA52P62987 BTF3P8-201ENST00000414577 526 ntBASIC0.62□□□□□ -2.31
UBA52P62987 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.62□□□□□ -2.31
UBA52P62987 PIGFP2-201ENST00000421400 651 ntBASIC0.62□□□□□ -2.31
UBA52P62987 BPY2DP-201ENST00000422208 265 ntBASIC0.62□□□□□ -2.31
UBA52P62987 RPS27P16-201ENST00000425758 201 ntBASIC0.62□□□□□ -2.31
UBA52P62987 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
UBA52P62987 MTCYBP16-201ENST00000509187 1129 ntBASIC0.62□□□□□ -2.31
UBA52P62987 AC025465.3-201ENST00000510570 311 ntBASIC0.62□□□□□ -2.31
UBA52P62987 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.62□□□□□ -2.31
UBA52P62987 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.62□□□□□ -2.31
UBA52P62987 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
UBA52P62987 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
UBA52P62987 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
UBA52P62987 RNU1-124P-201ENST00000363861 145 ntBASIC0.61□□□□□ -2.31
UBA52P62987 MIR193B-201ENST00000384907 83 ntBASIC0.61□□□□□ -2.31
UBA52P62987 AL139098.1-201ENST00000407291 389 ntBASIC0.61□□□□□ -2.31
UBA52P62987 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.61□□□□□ -2.31
UBA52P62987 TRIM60P13-201ENST00000432350 1283 ntBASIC0.61□□□□□ -2.31
UBA52P62987 AC098831.1-201ENST00000440661 216 ntBASIC0.61□□□□□ -2.31
UBA52P62987 JTBP1-201ENST00000441314 247 ntBASIC0.61□□□□□ -2.31
UBA52P62987 MTCO1P44-201ENST00000441935 243 ntBASIC0.61□□□□□ -2.31
UBA52P62987 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.61□□□□□ -2.31
UBA52P62987 HMGN3P1-201ENST00000453847 193 ntBASIC0.61□□□□□ -2.31
UBA52P62987 AC244505.3-201ENST00000454598 187 ntBASIC0.61□□□□□ -2.31
UBA52P62987 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.61□□□□□ -2.31
UBA52P62987 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC0.61□□□□□ -2.31
UBA52P62987 SNORA48.9-201ENST00000516419 162 ntBASIC0.61□□□□□ -2.31
UBA52P62987 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.61□□□□□ -2.31
UBA52P62987 AC006199.1-201ENST00000548728 219 ntBASIC0.61□□□□□ -2.31
UBA52P62987 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
UBA52P62987 AC016542.1-201ENST00000608259 493 ntBASIC0.61□□□□□ -2.31
UBA52P62987 FTX_3.1-201ENST00000610451 147 ntBASIC0.61□□□□□ -2.31
UBA52P62987 AP005212.4-201ENST00000614206 710 ntBASIC0.61□□□□□ -2.31
UBA52P62987 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
UBA52P62987 OR5T3-201ENST00000303059 1023 ntBASIC0.6□□□□□ -2.31
UBA52P62987 OR4G2P-201ENST00000328113 903 ntBASIC0.6□□□□□ -2.31
UBA52P62987 RNU6-884P-201ENST00000363889 107 ntBASIC0.6□□□□□ -2.31
UBA52P62987 MIR514A1-201ENST00000385133 98 ntBASIC0.6□□□□□ -2.31
UBA52P62987 USP9YP26-201ENST00000421008 661 ntBASIC0.6□□□□□ -2.31
UBA52P62987 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.6□□□□□ -2.31
UBA52P62987 USP9YP18-201ENST00000425912 695 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms