Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.22□□□□□ -1.57
USP46P62068 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
USP46P62068 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.21□□□□□ -1.58
USP46P62068 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP46P62068 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.21□□□□□ -1.58
USP46P62068 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
USP46P62068 RNU6-1285P-201ENST00000363480 105 ntBASIC5.21□□□□□ -1.58
USP46P62068 RNU6-1141P-201ENST00000364520 107 ntBASIC5.21□□□□□ -1.58
USP46P62068 RNU6-275P-201ENST00000364910 107 ntBASIC5.21□□□□□ -1.58
USP46P62068 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC5.21□□□□□ -1.58
USP46P62068 AL512633.1-201ENST00000399931 655 ntBASIC5.21□□□□□ -1.58
USP46P62068 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.21□□□□□ -1.58
USP46P62068 RN7SKP16-201ENST00000410180 299 ntBASIC5.21□□□□□ -1.58
USP46P62068 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.21□□□□□ -1.58
USP46P62068 HMGN2P30-201ENST00000423237 256 ntBASIC5.21□□□□□ -1.58
USP46P62068 AL137159.1-201ENST00000452808 512 ntBASIC5.21□□□□□ -1.58
USP46P62068 AP000705.1-201ENST00000454567 350 ntBASIC5.21□□□□□ -1.58
USP46P62068 RPL23AP56-201ENST00000460778 453 ntBASIC5.21□□□□□ -1.58
USP46P62068 RPS17P2-201ENST00000461663 408 ntBASIC5.21□□□□□ -1.58
USP46P62068 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.21□□□□□ -1.58
USP46P62068 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.21□□□□□ -1.58
USP46P62068 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.21□□□□□ -1.58
USP46P62068 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.21□□□□□ -1.58
USP46P62068 AC021231.3-201ENST00000558497 370 ntBASIC5.21□□□□□ -1.58
USP46P62068 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.21□□□□□ -1.58
USP46P62068 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.21□□□□□ -1.58
USP46P62068 MIR4737-201ENST00000583979 81 ntBASIC5.21□□□□□ -1.58
USP46P62068 AC004825.2-201ENST00000616634 455 ntBASIC5.21□□□□□ -1.58
USP46P62068 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP46P62068 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
USP46P62068 Z95331.1-201ENST00000623075 23112 ntBASIC5.21□□□□□ -1.58
USP46P62068 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP46P62068 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP46P62068 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
USP46P62068 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.21□□□□□ -1.58
USP46P62068 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP46P62068 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.2□□□□□ -1.58
USP46P62068 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP46P62068 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP46P62068 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP46P62068 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.2□□□□□ -1.58
USP46P62068 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.2□□□□□ -1.58
USP46P62068 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
USP46P62068 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP46P62068 Y_RNA.127-201ENST00000363386 109 ntBASIC5.2□□□□□ -1.58
USP46P62068 RNVU1-6-201ENST00000364688 164 ntBASIC5.2□□□□□ -1.58
USP46P62068 RNU1-100P-201ENST00000365255 165 ntBASIC5.2□□□□□ -1.58
USP46P62068 RNU4-11P-201ENST00000365287 132 ntBASIC5.2□□□□□ -1.58
USP46P62068 SNORA20-201ENST00000384662 132 ntBASIC5.2□□□□□ -1.58
USP46P62068 MIR549A-201ENST00000385268 96 ntBASIC5.2□□□□□ -1.58
USP46P62068 RNU6-1199P-201ENST00000411249 104 ntBASIC5.2□□□□□ -1.58
USP46P62068 RPL37P18-201ENST00000411602 243 ntBASIC5.2□□□□□ -1.58
USP46P62068 RPS20P14-201ENST00000412545 360 ntBASIC5.2□□□□□ -1.58
USP46P62068 AC092047.1-201ENST00000424997 240 ntBASIC5.2□□□□□ -1.58
USP46P62068 AC125238.1-201ENST00000448842 249 ntBASIC5.2□□□□□ -1.58
USP46P62068 RPL37P4-201ENST00000448908 268 ntBASIC5.2□□□□□ -1.58
USP46P62068 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.2□□□□□ -1.58
USP46P62068 DEFB131C-201ENST00000528817 165 ntBASIC5.2□□□□□ -1.58
USP46P62068 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.2□□□□□ -1.58
USP46P62068 AC090616.3-201ENST00000582184 217 ntBASIC5.2□□□□□ -1.58
USP46P62068 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.2□□□□□ -1.58
USP46P62068 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
USP46P62068 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP46P62068 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP46P62068 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP46P62068 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP46P62068 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP46P62068 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
USP46P62068 AL356489.2-201ENST00000566968 3528 ntBASIC5.19□□□□□ -1.58
USP46P62068 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP46P62068 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
USP46P62068 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP46P62068 Y_RNA.71-201ENST00000362892 104 ntBASIC5.19□□□□□ -1.58
USP46P62068 Y_RNA.218-201ENST00000364218 104 ntBASIC5.19□□□□□ -1.58
USP46P62068 MIR513C-201ENST00000401352 84 ntBASIC5.19□□□□□ -1.58
USP46P62068 FTH1P15-201ENST00000406984 280 ntBASIC5.19□□□□□ -1.58
USP46P62068 RN7SKP61-201ENST00000410642 295 ntBASIC5.19□□□□□ -1.58
USP46P62068 RPL30P13-201ENST00000418873 348 ntBASIC5.19□□□□□ -1.58
USP46P62068 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.19□□□□□ -1.58
USP46P62068 MTND4LP9-201ENST00000427694 174 ntBASIC5.19□□□□□ -1.58
USP46P62068 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.19□□□□□ -1.58
USP46P62068 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.19□□□□□ -1.58
USP46P62068 AC009127.3-201ENST00000570531 403 ntBASIC5.19□□□□□ -1.58
USP46P62068 RN7SL435P-201ENST00000584418 282 ntBASIC5.19□□□□□ -1.58
USP46P62068 MIR6748-201ENST00000610433 71 ntBASIC5.19□□□□□ -1.58
USP46P62068 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.19□□□□□ -1.58
USP46P62068 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
USP46P62068 AC063976.2-201ENST00000425667 3556 ntBASIC5.19□□□□□ -1.58
USP46P62068 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP46P62068 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
USP46P62068 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
USP46P62068 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP46P62068 AC000123.3-201ENST00000624029 4975 ntBASIC5.18□□□□□ -1.58
USP46P62068 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP46P62068 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.18□□□□□ -1.58
USP46P62068 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP46P62068 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.18□□□□□ -1.58
USP46P62068 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.18□□□□□ -1.58
USP46P62068 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.18□□□□□ -1.58
USP46P62068 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms